Query: NC_004307:1936725 Bifidobacterium longum NCC2705, complete genome
Start: 1936725, End: 1958907, Length: 22183
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010816:1989868* | 1989868 | 2011735 | 21868 | Bifidobacterium longum DJO10A, complete genome | 0 | 15730 | BLASTN svg | BLASTP svg |
NC_015052:2071759* | 2071759 | 2093633 | 21875 | Bifidobacterium longum subsp. infantis 157F, complete genome | 0 | 15600 | BLASTN svg | BLASTP svg |
NC_015067:2032271* | 2032271 | 2054099 | 21829 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 0 | 11450 | BLASTN svg | BLASTP svg |
NC_014151:30488* | 30488 | 60099 | 29612 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 1e-76 | 295 | BLASTN svg | BLASTP svg |
NC_015953:5444572* | 5444572 | 5472700 | 28129 | Streptomyces sp. SirexAA-E chromosome, complete genome | 3e-64 | 254 | BLASTN svg | BLASTP svg |
NC_018750:5828000* | 5828000 | 5850277 | 22278 | Streptomyces venezuelae ATCC 10712, complete genome | 5e-63 | 250 | BLASTN svg | BLASTP svg |
NC_006361:4098469* | 4098469 | 4147912 | 49444 | Nocardia farcinica IFM 10152, complete genome | 7e-47 | 196 | BLASTN svg | BLASTP svg |
NC_015067:2136048 | 2136048 | 2168969 | 32922 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_018750:4688968* | 4688968 | 4710738 | 21771 | Streptomyces venezuelae ATCC 10712, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_010572:3363830* | 3363830 | 3421214 | 57385 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_003888:5042283* | 5042283 | 5087561 | 45279 | Streptomyces coelicolor A3(2), complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_015052:1569255* | 1569255 | 1592979 | 23725 | Bifidobacterium longum subsp. infantis 157F, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_018870:2479114* | 2479114 | 2500642 | 21529 | Thermacetogenium phaeum DSM 12270 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_013521:3285423* | 3285423 | 3317099 | 31677 | Sanguibacter keddieii DSM 10542, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009664:1569335* | 1569335 | 1614690 | 45356 | Kineococcus radiotolerans SRS30216, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_021177:4912982* | 4912982 | 4935625 | 22644 | Streptomyces fulvissimus DSM 40593, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_003155:5957657* | 5957657 | 5981162 | 23506 | Streptomyces avermitilis MA-4680, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008618:10915* | 10915 | 35645 | 24731 | Bifidobacterium adolescentis ATCC 15703, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_007626:3393940* | 3393940 | 3442297 | 48358 | Magnetospirillum magneticum AMB-1, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014211:258659* | 258659 | 284882 | 26224 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015671:874500* | 874500 | 899423 | 24924 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015514:1088767* | 1088767 | 1114614 | 25848 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014151:2945037* | 2945037 | 2972099 | 27063 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |