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Query: NC_004307:1936725 Bifidobacterium longum NCC2705, complete genome

Start: 1936725, End: 1958907, Length: 22183

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010816:1989868*1989868201173521868Bifidobacterium longum DJO10A, complete genome015730BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome015600BLASTN svgBLASTP svg
NC_015067:2032271*2032271205409921829Bifidobacterium longum subsp. longum JCM 1217, complete genome011450BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-76295BLASTN svgBLASTP svg
NC_015953:5444572*5444572547270028129Streptomyces sp. SirexAA-E chromosome, complete genome3e-64254BLASTN svgBLASTP svg
NC_018750:5828000*5828000585027722278Streptomyces venezuelae ATCC 10712, complete genome5e-63250BLASTN svgBLASTP svg
NC_006361:4098469*4098469414791249444Nocardia farcinica IFM 10152, complete genome7e-47196BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-19105BLASTN svgBLASTP svg
NC_018750:4688968*4688968471073821771Streptomyces venezuelae ATCC 10712, complete genome8e-19103BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome8e-19103BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome8e-19103BLASTN svgBLASTP svg
NC_015052:1569255*1569255159297923725Bifidobacterium longum subsp. infantis 157F, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_018870:2479114*2479114250064221529Thermacetogenium phaeum DSM 12270 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_013521:3285423*3285423331709931677Sanguibacter keddieii DSM 10542, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_021177:4912982*4912982493562522644Streptomyces fulvissimus DSM 40593, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003155:5957657*5957657598116223506Streptomyces avermitilis MA-4680, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008618:10915*109153564524731Bifidobacterium adolescentis ATCC 15703, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014211:258659*25865928488226224Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid7e-1073.8BLASTN svgBLASTP svg
NC_015671:874500*87450089942324924Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015514:1088767*1088767111461425848Cellulomonas fimi ATCC 484 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014151:2945037*2945037297209927063Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg