Query: NC_004307:1620500 Bifidobacterium longum NCC2705, complete genome
Start: 1620500, End: 1640111, Length: 19612
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
|Subject Island||Start||End||Length||Subject Host Description||E-value||Bit score||Visual BLASTN||Visual BLASTP|
|NC_010816:1660066*||1660066||1684028||23963||Bifidobacterium longum DJO10A, complete genome||0||38270||BLASTN svg||BLASTP svg|
|NC_015067:2371428*||2371428||2393999||22572||Bifidobacterium longum subsp. longum JCM 1217, complete genome||0||37010||BLASTN svg||BLASTP svg|
|NC_015052:2383865*||2383865||2405999||22135||Bifidobacterium longum subsp. infantis 157F, complete genome||0||22680||BLASTN svg||BLASTP svg|
|NC_018720:2138180*||2138180||2179499||41320||Bifidobacterium asteroides PRL2011 chromosome, complete genome||4e-94||353||BLASTN svg||BLASTP svg|
|NC_013595:10329633*||10329633||10355999||26367||Streptosporangium roseum DSM 43021, complete genome||2e-10||75.8||BLASTN svg||BLASTP svg|
|NC_018750:3964784*||3964784||3983961||19178||Streptomyces venezuelae ATCC 10712, complete genome||6e-07||63.9||BLASTN svg||BLASTP svg|
|NC_015953:3684065*||3684065||3711599||27535||Streptomyces sp. SirexAA-E chromosome, complete genome||2e-06||61.9||BLASTN svg||BLASTP svg|
|NC_014830:4012999*||4012999||4039999||27001||Intrasporangium calvum DSM 43043 chromosome, complete genome||2e-06||61.9||BLASTN svg||BLASTP svg|
|NC_011886:4376261*||4376261||4407999||31739||Arthrobacter chlorophenolicus A6, complete genome||9e-06||60||BLASTN svg||BLASTP svg|
|NC_008541:4679022*||4679022||4709999||30978||Arthrobacter sp. FB24 chromosome 1, complete sequence||9e-06||60||BLASTN svg||BLASTP svg|