Pre_GI: BLASTP Hits

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Query: NC_004307:2208591:2216069 Bifidobacterium longum NCC2705, complete genome

Start: 2216069, End: 2217004, Length: 936

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010816:2326453:233521523352152336153939Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease2e-180631
NC_015737:1976000:199874019987401999660921Clostridium sp. SY8519, complete genomehypothetical protein1e-75283
NC_014828:1019533:105343610534361054380945Ethanoligenens harbinense YUAN-3 chromosome, complete genomerestriction endonuclease2e-68259
NC_016629:3789554:380652038065203807419900Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction endonuclease5e-67254
NC_015634:2595500:260832026083202609240921Bacillus coagulans 2-6 chromosome, complete genomerestriction endonuclease6e-67254
NC_007760:4055860:407073040707304071647918Anaeromyxobacter dehalogenans 2CP-C, complete genomeRestriction endonuclease8e-66250
NC_015711:8852850:886054888605488861465918Myxococcus fulvus HW-1 chromosome, complete genomerestriction endonuclease2e-64246
NC_015136:3127930:313911031391103140021912Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction endonuclease3e-64245
NC_015942:2213710:222298322229832223903921Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction endonuclease7e-64244
NC_014972:3604534:361095636109563611867912Desulfobulbus propionicus DSM 2032 chromosome, complete genomerestriction endonuclease7e-61234
NC_014408:1018448:101844810184481019362915Methanothermobacter marburgensis str. Marburg chromosome, completerestriction endonuclease2e-58226
NC_016943:4799915:481010748101074811024918Blastococcus saxobsidens DD2, complete genomemethylated adenine and cytosine restriction protein MRR8e-57220
NC_016609:8772011:878319487831948784117924Niastella koreensis GR20-10 chromosome, complete genomerestriction endonuclease2e-56219
NC_019902:1681320:169193116919311692776846Thioalkalivibrio nitratireducens DSM 14787, complete genomeMrr restriction system protein4e-56218
NC_013355:1332263:133409213340921335015924Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomerestriction endonuclease4e-55215
NC_009720:1248866:126216312621631263095933Xanthobacter autotrophicus Py2, complete genomerestriction endonuclease4e-55215
NC_015052:1771976:178563417856341785951318Bifidobacterium longum subsp. infantis 157F, complete genometruncated endonuclease3e-55215
NC_013757:1544348:155724815572481558171924Geodermatophilus obscurus DSM 43160, complete genomerestriction endonuclease1e-54213
NC_013169:2351475:236489723648972365817921Kytococcus sedentarius DSM 20547, complete genomerestriction endonuclease4e-54211
NC_013172:606387:611556611556612473918Brachybacterium faecium DSM 4810, complete genomerestriction endonuclease2e-52206
NC_008699:1673181:168467416846741685588915Nocardioides sp. JS614, complete genomerestriction endonuclease1e-48193
NC_015125:1668780:168198216819821682917936Microbacterium testaceum StLB037, complete genomerestriction endonuclease2e-45182
NC_006361:2920028:292679729267972927723927Nocardia farcinica IFM 10152, complete genomeputative 5-methyladenine/5-methylcytosine- specific restriction endonuclease2e-45182
NC_016887:3286436:332552633255263326431906Nocardia cyriacigeorgica GUH-2, complete genome5-methyladenine/5-methylcytosine-specific restriction endonuclease1e-44180
NC_004757:2657490:267325226732522674181930Nitrosomonas europaea ATCC 19718, complete genomeputative Mrr restriction system protein1e-44180
NC_014828:501342:514229514229514900672Ethanoligenens harbinense YUAN-3 chromosome, complete genomerestriction endonuclease5e-42171
NC_012759:4501206:452345645234564524370915Escherichia coli BW2952 chromosome, complete genomemethylated adenine and cytosine restriction protein9e-40164
AC_000091:4569379:459162945916294592543915Escherichia coli W3110 DNA, complete genomemethylated adenine and cytosine restriction protein9e-40164
NC_020211:554736:578572578572579489918Serratia marcescens WW4, complete genomemethylated adenine and cytosine restriction protein8e-39160
NC_018528:697553:699923699923700864942Lactobacillus helveticus R0052 chromosome, complete genomeMrr restiction system protein1e-35150
NC_015161:84526:890388903889985948Deinococcus proteolyticus MRP chromosome, complete genome3e-35149
NC_007761:241900:252008252008252757750Rhizobium etli CFN 42, complete genomeprobable restriction system protein3e-34145
NC_013592:446092:460968460968461882915Dickeya dadantii Ech586, complete genomerestriction endonuclease2e-33143
NC_011415:4767892:477854947785494779370822Escherichia coli SE11 chromosome, complete genomeputative restriction endonuclease6e-27121
NC_013971:3296272:331512533151253315946822Erwinia amylovora ATCC 49946 chromosome, complete genomerestriction endonuclease5e-26118
NC_013961:441719:455342455342456163822Erwinia amylovora, complete genomeMrr restriction system protein (EcoKMrr)5e-26118
NC_012526:2155947:217011221701122170978867Deinococcus deserti VCD115, complete genomeputative Mrr restriction endonuclease2e-22107
NC_015510:2907815:292809229280922928523432Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome2e-22106
NC_015387:261799:279083279083279400318Marinithermus hydrothermalis DSM 14884 chromosome, complete genome7e-21101
NC_007164:1434305:145219714521971452973777Corynebacterium jeikeium K411, complete genomemrr restriction system protein4e-1479
NC_013748:24498:3187931879329281050Haloterrigena turkmenica DSM 5511 plasmid pHTUR05, completerestriction endonuclease5e-1272
NC_015977:2309873:234377523437752344683909Roseburia hominis A2-183 chromosome, complete genomeC-terminus restriction endonuclease Mrr8e-1168.2
NC_015968:511282:527439527439528248810Enterobacter asburiae LF7a chromosome, complete genomerestriction endonuclease1e-1067.8
NC_014828:541874:547641547641547943303Ethanoligenens harbinense YUAN-3 chromosome, complete genome9e-1064.7
NC_014973:3452100:3482698348269834837411044Geobacter sp. M18 chromosome, complete genomerestriction endonuclease1e-0963.9
NC_013157:1:1577715777171501374Methanocaldococcus fervens AG86 plasmid pMEFER01, completerestriction endonuclease6e-0961.6
NC_003888:4613000:4621091462109146227251635Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0860.8
NC_008346:1117802:1126703112670311279681266Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease-like protein1e-0860.8
NC_017506:3825148:383632538363253836990666Marinobacter adhaerens HP15 chromosome, complete genomerestriction endonuclease9e-0857.8
NC_017093:835260:8481818481818497071527Actinoplanes missouriensis 431, complete genomeputative restriction endonuclease1e-0757.4
NC_006510:1400000:142107314210731422056984Geobacillus kaustophilus HTA426, complete genomehypothetical protein3e-0756.2
NC_019974:1115553:1126996112699611298572862Natronococcus occultus SP4, complete genomerestriction endonuclease3e-0756.2
NC_014915:1331459:135143513514351352424990Geobacillus sp. Y412MC52 chromosome, complete genomerestriction endonuclease3e-0755.8
NC_016818:3736213:3745548374554837471791632Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completerestriction endonuclease6e-0755.1
NC_007086:3805390:381741238174123818302891Xanthomonas campestris pv. campestris str. 8004, complete genomeputative Mrr restriction endonuclease1e-0654.3
NC_002936:1004570:1021119102111910221201002Dehalococcoides ethenogenes 195, complete genometype II restriction endonuclease, putative1e-0653.9
NC_010688:3740399:375172237517223752612891Xanthomonas campestris pv. campestris, complete genomeMrr restriction endonuclease, probable2e-0653.9
NC_014323:3195178:3203259320325932048661608Herbaspirillum seropedicae SmR1 chromosome, complete genomemrr restriction system protein2e-0653.5
NC_007508:1324000:132877513287751329665891Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMrr restriction endonuclease2e-0653.5
NC_008705:868623:9259519259519277801830Mycobacterium sp. KMS, complete genomeATPase associated with various cellular activities, AAA_52e-0653.1
NC_008146:861319:9172229172229190511830Mycobacterium sp. MCS, complete genomeATPase associated with various cellular activities, AAA_52e-0653.1
NC_010571:1334000:1337150133715013381511002Opitutus terrae PB90-1, complete genomerestriction endonuclease3e-0653.1
NC_016629:3789554:381560438156043816497894Desulfovibrio africanus str. Walvis Bay chromosome, completerestriction endonuclease3e-0652.8
NC_018750:4333064:4348966434896643510622097Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-0652.4
NC_017271:1289278:129299112929911293881891Xanthomonas campestris pv. raphani 756C chromosome, completeMrr restriction endonuclease5e-0652