Pre_GI: BLASTP Hits

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Query: NC_004307:1701071:1704570 Bifidobacterium longum NCC2705, complete genome

Start: 1704570, End: 1705220, Length: 651

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from infant feces. Normal human gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015067:2282000:229625422962542297009756Bifidobacterium longum subsp. longum JCM 1217, complete genometranscriptional regulator3e-127453
NC_017218:2223604:223857022385702239325756Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeSir2 family transcriptional regulator4e-121433
NC_012815:1862373:188172018817201882475756Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeNAD-dependent protein deacetylase2e-103374
NC_018720:176306:187454187454188209756Bifidobacterium asteroides PRL2011 chromosome, complete genomeNAD-dependent deacetylase3e-102370
NC_013721:1581370:159186315918631592636774Gardnerella vaginalis 409-05, complete genometranscriptional regulator, Sir2 family1e-100365
NC_006361:4597718:462655946265594627305747Nocardia farcinica IFM 10152, complete genomeputative Sir2 family regulator1e-36152
NC_012588:211633:233284233284234027744Sulfolobus islandicus M.14.25 chromosome, complete genomeNAD-dependent deacetylase5e-27120
NC_013192:2381901:238190123819012382635735Leptotrichia buccalis DSM 1135, complete genomeSilent information regulator protein Sir22e-25115
NC_017955:3545626:357880835788083579542735Modestobacter marinus, complete genomesilent information regulator protein Sir24e-25114
NC_020134:1243122:124446512444651245205741Clostridium stercorarium subsp. stercorarium DSM 8532, completeNAD-dependent deacetylase CobB5e-24110
NC_008782:1917634:191908219190821919966885Acidovorax sp. JS42, complete genomeSilent information regulator protein Sir24e-23108
NC_015514:3877810:389519138951913896027837Cellulomonas fimi ATCC 484 chromosome, complete genomeSilent information regulator protein Sir26e-23107
NC_012778:2015409:202105720210572021773717Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-22106
NC_008593:2457594:246274724627472463484738Clostridium novyi NT, complete genometranscriptional regulator, Sir2 family2e-22105
NC_012563:36000:756617566176404744Clostridium botulinum A2 str. Kyoto, complete genomeNAD-dependent deacetylase, Sir2 family3e-22105
NC_010520:35845:755227552276265744Clostridium botulinum A3 str. Loch Maree, complete genomeNAD-dependent deacetylase3e-22105
NC_015425:2690448:269593226959322696672741Clostridium botulinum BKT015925 chromosome, complete genomesilent information regulator protein Sir25e-22104
NC_010516:42475:813938139382136744Clostridium botulinum B1 str. Okra, complete genomeNAD-dependent deacetylase5e-22104
NC_009718:799431:815810815810816544735Fervidobacterium nodosum Rt17-B1, complete genomesilent information regulator protein Sir25e-22104
NC_005296:2860000:286442928644292865190762Rhodopseudomonas palustris CGA009, complete genomeSir2 family, possible ADP ribosyltransferase1e-21103
NC_009495:38000:817368173682479744Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeNAD-dependent deacetylase1e-21103
NC_009697:38000:745397453975282744Clostridium botulinum A str. ATCC 19397 chromosome, completeNAD-dependent deacetylase1e-21103
NC_009698:38000:745407454075283744Clostridium botulinum A str. Hall chromosome, complete genomeNAD-dependent deacetylase1e-21103
NC_009012:75000:984989849899223726Clostridium thermocellum ATCC 27405, complete genomeSilent information regulator protein Sir29e-22103
NC_012658:35500:756397563976382744Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNAD-dependent deacetylase8e-22103
NC_009699:33452:764307643077173744Clostridium botulinum F str. Langeland chromosome, complete genomeNAD-dependent deacetylase7e-22103
NC_017297:33519:766987669877441744Clostridium botulinum F str. 230613 chromosome, complete genomeNAD-dependent deacetylase7e-22103
NC_014364:2322269:237651123765112377272762Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeSilent information regulator protein Sir22e-21102
NC_015947:223184:235983235983236789807Burkholderia sp. JV3 chromosome, complete genomeNAD-dependent deacetylase2e-21102
NC_017179:1378875:137887513788751379612738Clostridium difficile BI1, complete genomeNAD-dependent deacetylase3e-21101
NC_015687:303810:323838323838324575738Clostridium acetobutylicum DSM 1731 chromosome, complete genomeNAD-dependent deacetylase4e-21101
NC_003030:303812:323841323841324578738Clostridium acetobutylicum ATCC 824, complete genomeNAD-dependent deacetylase4e-21101
NC_015434:3581001:360373036037303604596867Verrucosispora maris AB-18-032 chromosome, complete genomesilent information regulator protein sir24e-21101
NC_014328:85290:135894135894136619726Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeNAD-dependent deacetylase7e-21100
NC_014834:3130715:318282231828223183583762Rhodopseudomonas palustris DX-1 chromosome, complete genomesilent information regulator protein Sir26e-21100
NC_016894:1092005:110959211095921110305714Acetobacterium woodii DSM 1030 chromosome, complete genomeNAD-dependent histone deacetylase silent information regulator Sir25e-21100
NC_014831:786011:795463795463796236774Thermaerobacter marianensis DSM 12885 chromosome, complete genomeSilent information regulator protein Sir21e-2099.8
NC_015499:197945:199114199114199836723Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNAD-dependent deacetylase2e-2099.4
NC_012914:5446366:546311454631145463833720Paenibacillus sp. JDR-2, complete genomeSilent information regulator protein Sir22e-2098.6
NC_011837:3776541:378149537814953782220726Clostridium kluyveri NBRC 12016, complete genomeNAD-dependent deacetylase4e-2098.2
NC_009706:3845039:384999338499933850718726Clostridium kluyveri DSM 555 chromosome, complete genomeNAD-dependent deacetylase4e-2098.2
NC_010003:1444623:146519314651931465963771Petrotoga mobilis SJ95, complete genomeSilent information regulator protein Sir21e-1996.7
NC_009953:2867864:287587428758742876746873Salinispora arenicola CNS-205 chromosome, complete genomesilent information regulator protein Sir21e-1996.7
NC_013946:2050871:207572920757292076466738Meiothermus ruber DSM 1279 chromosome, complete genomeSilent information regulator protein Sir21e-1996.3
NC_014831:2082304:210937021093702110155786Thermaerobacter marianensis DSM 12885 chromosome, complete genomeSilent information regulator protein Sir22e-1995.9
NC_014624:2569604:257321225732122573940729Eubacterium limosum KIST612 chromosome, complete genomeNAD-dependent protein deacetylase6e-1994
NC_013595:9651019:965367796536779654558882Streptosporangium roseum DSM 43021, complete genomesilent information regulator protein Sir22e-1892.4
NC_009380:2664419:267383226738322674743912Salinispora tropica CNB-440 chromosome, complete genomesilent information regulator protein Sir22e-1892.4
NC_020133:4889034:490295549029554903665711Mycobacterium liflandii 128FXT, complete genometranscriptional regulatory protein4e-1891.3
NC_007650:722961:735996735996736931936Burkholderia thailandensis E264 chromosome II, complete sequencetranscriptional regulator, Sir2 family5e-1891.3
NC_012781:3087467:310391231039123104697786Eubacterium rectale ATCC 33656, complete genomeNAD-dependent deacetylase1e-1790.1
NC_002947:6152500:615952161595216160309789Pseudomonas putida KT2440, complete genometranscriptional regulator, Sir2 family1e-1790.1
NC_010501:2609567:261917926191792619937759Pseudomonas putida W619, complete genomeSilent information regulator protein Sir22e-1789
NC_021182:162236:178618178618179343726Clostridium pasteurianum BC1, complete genomeNAD-dependent protein deacetylase, SIR2 family9e-1787
NC_011725:2949519:295578529557852956513729Bacillus cereus B4264 chromosome, complete genomeNAD-dependent deacetylase2e-1685.9
NC_010501:30000:372353723538023789Pseudomonas putida W619, complete genomeSilent information regulator protein Sir26e-1684.3
NC_004578:5269194:527751752775175278287771Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, Sir2 family5e-1684.3
NC_016048:2734563:275271827527182753437720Oscillibacter valericigenes Sjm18-20, complete genomeNAD-dependent deacetylase3e-1582
NC_020164:701151:728140728140728868729Staphylococcus warneri SG1, complete genomeNAD-dependent deacetylase3e-1582
NC_009075:2428248:243075924307592431697939Burkholderia pseudomallei 668 chromosome II, complete sequenceNAD-dependent deacetylase, Sir2 family1e-1480.1
NC_009079:402891:415659415659416597939Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, Sir2 family1e-1479.7
NC_006349:400807:413467413467414405939Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceNAD-dependent deacetylase1e-1479.7
NC_008835:1827905:184361618436161844554939Burkholderia mallei NCTC 10229 chromosome I, complete sequencetranscriptional regulator, Sir2 family1e-1479.7
NC_009078:2351046:235355723535572354489933Burkholderia pseudomallei 1106a chromosome II, complete sequenceNAD-dependent deacetylase, Sir2 family1e-1479.7
NC_006351:2398403:240091324009132401851939Burkholderia pseudomallei K96243 chromosome 2, complete sequenceNAD-dependent deacetylase2e-1479.3
NC_007435:1077792:1083428108342810858212394Burkholderia pseudomallei 1710b chromosome II, complete sequenceNAD-dependent deacetylase3e-1478.6
NC_012590:37697:683226832269245924Corynebacterium aurimucosum ATCC 700975, complete genomeputative sir2-like regulatory protein4e-1478.2
NC_014246:536338:540837540837541682846Mobiluncus curtisii ATCC 43063 chromosome, complete genomeSir2 family NAD-dependent deacetylase4e-1478.2
NC_010545:83353:921749217492974801Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein4e-1478.2
NC_020302:85821:107601107601108566966Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein5e-1477.8
NC_015859:1631573:163523816352381636170933Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein5e-1477.8
NC_007164:62816:714117141172226816Corynebacterium jeikeium K411, complete genomehypothetical protein8e-1373.9
NC_018678:2382708:238558923855892386314726Alteromonas macleodii str. 'English Channel 673' chromosome,NAD-dependent deacetylase1e-1273.2
NC_016582:1707756:171773717177371718480744Streptomyces bingchenggensis BCW-1 chromosome, complete genomeNAD-dependent deacetylase1e-1273.2
NC_015144:367278:387853387853388521669Weeksella virosa DSM 16922 chromosome, complete genomeNAD-dependent deacetylase2e-1272
NC_007645:6991163:699560969956096996292684Hahella chejuensis KCTC 2396, complete genomeNAD-dependent protein deacetylases, SIR2 family1e-1169.7
NC_007005:2686551:273978227397822740627846Pseudomonas syringae pv. syringae B728a, complete genomeSilent information regulator protein Sir21e-1169.7
NC_009092:1874888:191176719117671912513747Shewanella loihica PV-4, complete genomeSilent information regulator protein Sir21e-1169.7
NC_015160:2239933:226290622629062263595690Odoribacter splanchnicus DSM 20712 chromosome, complete genomeNAD-dependent deacetylase2e-1169.3
NC_014098:2735500:274705627470562747796741Bacillus tusciae DSM 2912 chromosome, complete genomeSilent information regulator protein Sir22e-1168.9
NC_017030:3771675:377429437742943775025732Corallococcus coralloides DSM 2259 chromosome, complete genomeNAD-dependent deacetylase3e-1168.6
NC_013416:820989:824905824905825603699Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscriptional regulator, Sir2 family4e-1168.2
NC_019897:763412:763935763935764663729Thermobacillus composti KWC4 chromosome, complete genomeNAD-dependent protein deacetylase, SIR2 family4e-1168.2
NC_016513:1126263:113017711301771130875699Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeSir2 family transcriptional regulator7e-1167.4
NC_013410:89811:113109113109113798690Fibrobacter succinogenes subsp. succinogenes S85 chromosome,silent information regulator protein Sir21e-1066.6
NC_010163:285710:300176300176300886711Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein3e-1065.1
NC_016599:2119631:213572421357242136440717Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeNAD-dependent protein deacetylase, SIR2 family6e-1064.3
NC_015978:352478:379822379822380532711Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeNAD-dependent deacetylase1e-0860.1