Pre_GI: BLASTP Hits

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Query: NC_004129:5373886:5444784 Pseudomonas fluorescens Pf-5, complete genome

Start: 5444784, End: 5446316, Length: 1533

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4650071465007146515821512Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein0806
NC_008463:5313527:5344464534446453459751512Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein0803
NC_018080:5091772:5175662517566251771971536Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein0797
NC_021150:3698696:3701737370173737033021566Azotobacter vinelandii CA6, complete genomehypothetical protein0777
NC_012560:3698697:3701738370173837033031566Azotobacter vinelandii DJ, complete genomehypothetical protein0777
NC_010170:1152131:1152131115213111536781548Bordetella petrii, complete genomehypothetical protein1e-178626
NC_015379:2417312:2431509243150924330141506Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-177623
NC_010688:2850164:2852894285289428544141521Xanthomonas campestris pv. campestris, complete genomehypothetical protein8e-177620
NC_012691:2614603:2674911267491126764311521Tolumonas auensis DSM 9187, complete genomehypothetical protein7e-177620
NC_010170:1551923:1554769155476915562861518Bordetella petrii, complete genomehypothetical protein2e-176619
NC_009138:1974935:2034547203454720360641518Herminiimonas arsenicoxydans, complete genomehypothetical protein3e-176618
NC_010002:4572573:4576423457642345779461524Delftia acidovorans SPH-1, complete genomehypothetical protein6e-176617
NC_014640:1179382:1182118118211811836351518Achromobacter xylosoxidans A8 chromosome, complete genomeTraG-like family protein1e-175616
NC_015726:2862500:2872138287213828736551518Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein3e-175615
NC_007086:1224867:1254415125441512559531539Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-175615
NC_003902:3666544:3691843369184336933811539Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-175615
NC_005773:866157:8732058732058747371533Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-175614
NC_007005:1605000:1614863161486316164011539Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-174611
NC_008825:2564965:2564965256496525664881524Methylibium petroleiphilum PM1, complete genomehypothetical protein9e-174610
NC_013421:1744928:1758243175824317597601518Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-173608
NC_011662:1017933:1032128103212810336481521Thauera sp. MZ1T, complete genomehypothetical protein4e-173608
NC_010170:1417615:1438707143870714402241518Bordetella petrii, complete genomehypothetical protein4e-172604
NC_006513:1379735:1429227142922714307531527Azoarcus sp. EbN1, complete genomehypothetical protein1e-171603
NC_012912:483390:4950984950984966211524Dickeya zeae Ech1591, complete genomehypothetical protein9e-172603
NC_008344:49039:7248472484739891506Nitrosomonas eutropha C91, complete genomehypothetical protein6e-172603
NC_008752:620802:6342056342056357191515Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-166586
NC_017986:409899:4115694115694131071539Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-140499
NC_010501:3671517:3674161367416136756991539Pseudomonas putida W619, complete genomehypothetical protein8e-140497
NC_016830:3869572:3887861388786138894021542Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-138491
NC_015733:2581324:2630368263036826319061539Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-138491
NC_012660:2045398:2096451209645120980071557Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-136487
NC_007492:3462929:3465587346558734671311545Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-135482
NC_009512:3334579:3337277333727733388151539Pseudomonas putida F1, complete genomehypothetical protein2e-134479
NC_004578:895019:9149419149419160501110Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-130466
NC_012731:560199:5837235837235852251503Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-126452
NC_016832:4425330:4428465442846544299701506Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-123443
NC_012125:4536383:4539518453951845410231506Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-123443
NC_003198:4453457:4456592445659244580971506Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-123443
NC_013716:3512950:3530805353080535322831479Citrobacter rodentium ICC168, complete genomeputative conjugative transfer system protein TraG (fragment)2e-121436
NC_010067:3056774:3061889306188930633701482Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-121434
NC_012779:346998:3584833584833600181536Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-119429
NC_009832:4564752:4615842461584246173651524Serratia proteamaculans 568, complete genomehypothetical protein3e-118426
NC_015566:345084:3497683497683512851518Serratia sp. AS12 chromosome, complete genomehypothetical protein8e-117421
NC_015567:346500:3499333499333514501518Serratia sp. AS9 chromosome, complete genomehypothetical protein8e-117421
NC_014029:331919:3818303818303833681539Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-116420
NC_004547:639726:6425056425056440371533Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-116420
NC_013892:1457500:1460290146029014618041515Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-116418
NC_010554:2789722:2807168280716828086791512Proteus mirabilis HI4320, complete genomehypothetical protein4e-114412
NC_014228:3442159:3457762345776234592761515Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-113407
NC_016845:4498097:4516301451630145178301530Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-109397
NC_012214:3303955:3316315331631533178441530Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-109395
NC_014228:3353896:3368038336803833694321395Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-108392
NC_013421:701005:7220397220397236041566Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-107390
NC_016809:112410:1178701178701193631494Haemophilus influenzae 10810, complete genomehypothetical protein1e-96353
NC_014532:3596097:3597877359787735994181542Halomonas elongata DSM 2581, complete genomehypothetical protein9e-89327
NC_014228:3391500:3397524339752433986121089Xenorhabdus nematophila ATCC 19061, complete genome2e-85316
NC_018691:2288000:2301030230103023025261497Alcanivorax dieselolei B5 chromosome, complete genomeputative membrane protein-like protein2e-81303
NC_008752:3007073:3022694302269430243191626Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein8e-52205
NC_009792:3245368:325210332521033252726624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-52205
NC_015572:2186394:2230093223009322316131521Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-47190
NC_015554:4648919:4669419466941946709871569Alteromonas sp. SN2 chromosome, complete genomehypothetical protein6e-42172
NC_009792:3245368:325301532530153253584570Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-39162
NC_004578:895019:911253911253911717465Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-35150
NC_018697:1343756:1375990137599013775341545Cycloclasticus sp. P1 chromosome, complete genomehypothetical protein1e-34148
NC_014228:3391500:339709933970993397506408Xenorhabdus nematophila ATCC 19061, complete genome1e-1894.7