Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:5373886:5431796 Pseudomonas fluorescens Pf-5, complete genome

Start: 5431796, End: 5432440, Length: 645

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:3667177:368823536882353688891657Azotobacter vinelandii DJ, complete genomehypothetical protein6e-89326
NC_021150:3667176:368823436882343688890657Azotobacter vinelandii CA6, complete genomehypothetical protein6e-89326
NC_007005:1636875:163621016362101636878669Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-76285
NC_008463:5313527:533360453336045334263660Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-72272
NC_018080:5091772:516286251628625163521660Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-72272
NC_009656:4527457:463785146378514638510660Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-72271
NC_004578:934867:934867934867935535669Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-72271
NC_015422:1876102:189739618973961898088693Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein2e-68258
NC_011662:1017933:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein4e-68257
NC_011662:1041725:104405910440591044751693Thauera sp. MZ1T, complete genomehypothetical protein4e-68257
NC_006513:1379735:144125214412521441941690Azoarcus sp. EbN1, complete genomehypothetical protein1e-66252
NC_015726:2862500:288414228841422884831690Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-66251
NC_011901:2983555:299505029950502995718669Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein3e-66251
NC_010170:1498253:153877915387791539471693Bordetella petrii, complete genomehypothetical protein3e-65248
NC_012660:2045398:210744521074452108095651Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-65247
NC_009138:1974935:202343620234362024125690Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-64246
NC_008344:49039:901319013190811681Nitrosomonas eutropha C91, complete genomeputative secreted protein7e-65246
NC_015379:2417312:244532024453202446003684Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-64245
NC_012691:2614603:266385626638562664536681Tolumonas auensis DSM 9187, complete genomeputative secreted protein2e-64245
NC_016830:3869572:391514739151473915788642Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-64244
NC_011992:1213726:123132712313271232019693Acidovorax ebreus TPSY, complete genomeputative secreted protein2e-64244
NC_012912:483390:507092507092507772681Dickeya zeae Ech1591, complete genomeputative secreted protein2e-62238
NC_015566:316340:336913336913337584672Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-58226
NC_009832:4521585:454908745490874549758672Serratia proteamaculans 568, complete genomehypothetical protein1e-58226
NC_009708:4182460:418809741880974188750654Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-57223
NC_014029:331919:367298367298367969672Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-57221
NC_010554:2789722:282045428204542821098645Proteus mirabilis HI4320, complete genomehypothetical protein8e-57219
NC_014228:3534378:353999135399913540647657Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-56218
NC_013892:1483000:149131714913171491973657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-55214
NC_013892:3278647:330606333060633306719657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-54211
NC_004547:611178:631392631392632048657Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-53208
NC_012731:600518:605557605557606240684Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-52205
NC_015572:2186394:221947522194752220119645Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein4e-41167