Pre_GI: BLASTP Hits

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Query: NC_004129:5373886:5424720 Pseudomonas fluorescens Pf-5, complete genome

Start: 5424720, End: 5425226, Length: 507

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008344:49039:964559645596997543Nitrosomonas eutropha C91, complete genomehypothetical protein3e-32137
NC_018080:5091772:515336551533655153865501Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-32137
NC_009656:4527457:462835746283574628857501Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein6e-32136
NC_011662:1058794:106095910609591061492534Thauera sp. MZ1T, complete genomehypothetical protein7e-32136
NC_012691:2614603:265744426574442657989546Tolumonas auensis DSM 9187, complete genomeputative secreted protein2e-31134
NC_015422:1876102:187671918767191877252534Alicycliphilus denitrificans K601 chromosome, complete genomeintegrating conjugative element protein1e-30132
NC_008825:2525380:254436325443632544896534Methylibium petroleiphilum PM1, complete genomehypothetical protein5e-30130
NC_012912:483390:515437515437515979543Dickeya zeae Ech1591, complete genomehypothetical protein7e-30129
NC_008782:2326439:234449623444962345029534Acidovorax sp. JS42, complete genomehypothetical protein2e-29128
NC_006513:1379735:145912114591211459657537Azoarcus sp. EbN1, complete genomehypothetical protein4e-28124
NC_007005:1636875:164312416431241643630507Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-27122
NC_011901:2983555:298355529835552984091537Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein8e-28122
NC_003919:2639080:263968826396882640260573Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-27121
NC_011992:1234610:123624512362451236784540Acidovorax ebreus TPSY, complete genomeputative secreted protein1e-26119
NC_013892:1483000:149708814970881497630543Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-26118
NC_010170:1498253:153325815332581533806549Bordetella petrii, complete genomehypothetical protein2e-26117
NC_008752:558828:572783572783573367585Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-26117
NC_010002:4544818:456024645602464560794549Delftia acidovorans SPH-1, complete genomehypothetical protein3e-25114
NC_010170:4533416:453560545356054536153549Bordetella petrii, complete genomeconserved exported protein3e-25114
NC_009138:1974935:201276820127682013316549Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative signal peptide1e-24112
NC_014228:3391500:342240734224073422949543Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-24110
NC_013892:3278647:329953832995383300077540Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-24110
NC_009708:4182460:419766841976684198189522Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-23107
NC_014029:331919:361177361177361701525Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-23107
NC_016845:4539381:454151845415184542030513Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-23106
NC_015379:2417312:245091224509122451340429Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein2e-22104
NC_005126:1223042:124503512450351245571537Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-22104
NC_009832:358291:376536376536377060525Serratia proteamaculans 568, complete genomehypothetical protein5e-22103
NC_004547:611178:624609624609625130522Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-21102
NC_014228:3391500:340217234021723402501330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-21100
NC_015567:313035:331149331149331673525Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein1e-2099.4
NC_015566:316340:330984330984331508525Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein1e-2099.4
NC_014532:3555550:357447835744783575026549Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1995.1
NC_015572:2186394:220860622086062209097492Methylomonas methanica MC09 chromosome, complete genomeintegrating conjugative element protein4e-1787.4
NC_016830:4010637:401815740181574018474318Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-1786.7
NC_013716:3512950:354268135426813543016336Citrobacter rodentium ICC168, complete genome7e-1786.3
NC_020181:3328844:334564033456403346047408Enterobacter aerogenes EA1509E, complete genomeFIG01045828: hypothetical protein3e-1684.3
NC_011751:256830:273350273350273862513Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-1373.9
NC_007946:258747:271135271135271647513Escherichia coli UTI89, complete genomehypothetical protein6e-1373.6
NC_008563:258725:271113271113271625513Escherichia coli APEC O1, complete genomehypothetical protein6e-1373.6
NC_011742:258746:271134271134271646513Escherichia coli S88 chromosome, complete genomehypothetical protein6e-1373.6
NC_011745:258727:273033273033273545513Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-1373.6
NC_008253:257059:270484270484270972489Escherichia coli 536, complete genomehypothetical protein6e-1373.6
NC_016830:3869572:392531839253183925527210Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-0857
NC_007484:667879:677870677870678430561Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein1e-0755.8