Pre_GI: BLASTP Hits

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Query: NC_004129:5373886:5399717 Pseudomonas fluorescens Pf-5, complete genome

Start: 5399717, End: 5400862, Length: 1146

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:1705406:1705406170540617065391134Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-97355
NC_008463:5246954:5277443527744352785671125Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus protein1e-96353
NC_009656:4527457:4603026460302646041501125Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein2e-96352
NC_018080:5091772:5122434512243451235551122Pseudomonas aeruginosa DK2 chromosome, complete genometype IV B pilus protein4e-68258
NC_016830:3869572:392775739277573928299543Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-38160
NC_013892:3278647:329832832983283298864537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein (fragment)3e-37156
NC_014029:331919:358410358410359042633Yersinia pestis Z176003 chromosome, complete genomehypothetical protein9e-36151
NC_009832:358291:373757373757374401645Serratia proteamaculans 568, complete genometype IV B pilus protein2e-35150
NC_015566:316340:328211328211328855645Serratia sp. AS12 chromosome, complete genometype IV B pilus protein1e-34147
NC_015567:313035:328376328376329020645Serratia sp. AS9 chromosome, complete genometype IV B pilus protein1e-34147
NC_014228:3391500:342119734211973421733537Xenorhabdus nematophila ATCC 19061, complete genomeputative pilL protein (fragment)9e-34144
NC_016845:4539381:454404645440464544615570Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV B pilus protein7e-33141
NC_013892:1483000:149830414983041498840537Xenorhabdus bovienii SS-2004 chromosome, complete genomePilL protein8e-33141
NC_004547:590844:6042376042376055531317Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein1e-30134
NC_010170:1498253:153070915307091531308600Bordetella petrii, complete genomeputative secreted protein3e-29129
NC_005126:1223042:1227913122791312289741062Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-29129
NC_011662:1058794:106346710634671064039573Thauera sp. MZ1T, complete genomehypothetical protein4e-28125
NC_012912:483390:517914517914518483570Dickeya zeae Ech1591, complete genomeputative secreted protein2e-27123
NC_009138:1974935:201019220101922010812621Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-27123
NC_012691:2614603:265491526549152655478564Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-27123
NC_015379:2417312:245286824528682453395528Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative exported protein5e-27122
NC_008782:2326439:234708123470812347692612Acidovorax sp. JS42, complete genomehypothetical protein6e-27122
NC_010002:4544818:455769445576944558272579Delftia acidovorans SPH-1, complete genomeputative secreted protein8e-27121
NC_010170:4533416:453812745381274538705579Bordetella petrii, complete genomeputative lipoprotein8e-27121
NC_008825:2525380:254173025417302542311582Methylibium petroleiphilum PM1, complete genomehypothetical protein4e-26119
NC_011992:1234610:123873112387311239330600Acidovorax ebreus TPSY, complete genomeputative secreted protein8e-26118
NC_014532:3555550:357098835709883571638651Halomonas elongata DSM 2581, complete genomeK02487 type IV pili sensor histidine kinase/response regulator2e-25117
NC_006513:1379735:146161514616151462184570Azoarcus sp. EbN1, complete genomehypothetical protein5e-25115
NC_008752:558828:575379575379575948570Acidovorax avenae subsp. citrulli AAC00-1, complete genomePilL protein3e-23109
NC_008344:49039:989569895699537582Nitrosomonas eutropha C91, complete genomehypothetical protein5e-23108
NC_020181:3328844:334341233434123343876465Enterobacter aerogenes EA1509E, complete genomePilL6e-22105
NC_013716:3512950:354470735447073545138432Citrobacter rodentium ICC168, complete genome7e-22105
NC_009512:3282500:331470433147043315219516Pseudomonas putida F1, complete genomehypothetical protein8e-21101
NC_012731:600518:618745618745619452708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative type IV pilus protein1e-1687.4
NC_007507:11000:112951129512134840Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilL-like lipoprotein2e-1480.9
NC_005126:2063667:207183020718302072171342Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1377.4
NC_015572:2186394:219623621962362196805570Methylomonas methanica MC09 chromosome, complete genomehypothetical protein8e-1375.1
NC_008739:41793:438064380644255450Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencePilL protein3e-0963.2
NC_007484:667879:675757675757676251495Nitrosococcus oceani ATCC 19707, complete genomePilL protein4e-0756.2