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Query: NC_004129:5204500:5224787 Pseudomonas fluorescens Pf-5, complete genome

Start: 5224787, End: 5225815, Length: 1029

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3505234:3522956352295635239931038Azotobacter vinelandii CA6, complete genomearginine N-succinyltransferase1e-154545
NC_012560:3505235:3522957352295735239941038Azotobacter vinelandii DJ, complete genomearginine N-succinyltransferase1e-154545
NC_020064:2779864:2797946279794627989801035Serratia marcescens FGI94, complete genomearginine N-succinyltransferase4e-95348
NC_014618:2705769:2704738270473827057721035Enterobacter cloacae SCF1 chromosome, complete genomearginine N-succinyltransferase7e-91334
NC_015663:4347187:4368493436849343695181026Enterobacter aerogenes KCTC 2190 chromosome, complete genomearginine succinyltransferase3e-83308
NC_014259:2948335:2965561296556129666551095Acinetobacter sp. DR1 chromosome, complete genomearginine N-succinyltransferase2e-82306
NC_021150:3505234:3524028352402835250441017Azotobacter vinelandii CA6, complete genomearginine N-succinyltransferase4e-54212
NC_012560:3505235:3524029352402935250451017Azotobacter vinelandii DJ, complete genomearginine N-succinyltransferase4e-54212