Pre_GI: BLASTP Hits

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Query: NC_004129:4434259:4453301 Pseudomonas fluorescens Pf-5, complete genome

Start: 4453301, End: 4453636, Length: 336

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:3813039:383308138330813833350270Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein1e-1374.7
NC_014733:1073540:109986410998641100136273Methylovorus sp. MP688 chromosome, complete genomesignal peptide protein2e-1064.3
NC_021172:169215:192476192476192760285Hyphomicrobium denitrificans 1NES1, complete genomehypothetical protein5e-0856.6
NC_011894:6295807:631142863114286311703276Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-0856.2