Some Help

Query: NC_004129:4434259:4453301 Pseudomonas fluorescens Pf-5, complete genome

Start: 4453301, End: 4453636, Length: 336

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:3813039:383308138330813833350270Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein1e-1374.7
NC_014733:1073540:109986410998641100136273Methylovorus sp. MP688 chromosome, complete genomesignal peptide protein2e-1064.3
NC_021172:169215:192476192476192760285Hyphomicrobium denitrificans 1NES1, complete genomehypothetical protein5e-0856.6
NC_011894:6295807:631142863114286311703276Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-0856.2