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Query: NC_004129:4434259:4452756 Pseudomonas fluorescens Pf-5, complete genome

Start: 4452756, End: 4453301, Length: 546

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:3813039:383246438324643833018555Pseudogulbenkiania sp. NH8B, complete genomecytochrome B5614e-28124
NC_011894:6295807:631170863117086312295588Methylobacterium nodulans ORS 2060, complete genomecytochrome B5614e-24110
NC_021172:169215:192738192738193283546Hyphomicrobium denitrificans 1NES1, complete genomecytochrome B5619e-2096.3
NC_019940:3863124:387891138789113879525615Thioflavicoccus mobilis 8321 chromosome, complete genomecytochrome b1e-1995.9
NC_015633:2565753:258832425883242588863540Vibrio anguillarum 775 chromosome chromosome I, complete sequencehydrogenase cytochrome b-type subunit-like protein2e-1582
NC_010524:3302398:332463433246343325344711Leptothrix cholodnii SP-6, complete genomecytochrome B5612e-1272
NC_008576:357893:364293364293364868576Magnetococcus sp. MC-1, complete genomecytochrome B5619e-1063.2
NC_016002:1765959:178143817814381782112675Pseudogulbenkiania sp. NH8B, complete genomecytochrome B5614e-0651.2