Pre_GI: BLASTP Hits

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Query: NC_004129:4434259:4444559 Pseudomonas fluorescens Pf-5, complete genome

Start: 4444559, End: 4444942, Length: 384

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:6023926:603374760337476034130384Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-48189
NC_010501:734363:747768747768748151384Pseudomonas putida W619, complete genomeMazG nucleotide pyrophosphohydrolase3e-46183
NC_018080:2288700:232961423296142329994381Pseudomonas aeruginosa DK2 chromosome, complete genomeMazG nucleotide pyrophosphohydrolase domain-containing protein4e-36149
NC_010334:2131939:213853021385302138886357Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein3e-1993.6
NC_013061:1052957:108043310804331080765333Pedobacter heparinus DSM 2366, complete genomeMazG nucleotide pyrophosphohydrolase2e-1891.3
NC_007963:1190847:121897912189791219335357Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein3e-1890.1
NC_008340:1303607:131820113182011318572372Alkalilimnicola ehrlichei MLHE-1, complete genomehypothetical protein8e-1889
NC_017075:3165858:3181495318149531827181224Rubrivivax gelatinosus IL144, complete genomehypothetical protein8e-1889
NC_017192:1841987:185193018519301852286357Arcobacter sp. L, complete genomehypothetical protein9e-1889
NC_014391:3445672:345497834549783455313336Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeMazG nucleotide pyrophosphohydrolase1e-1788.6
NC_014532:2664139:270087727008772701233357Halomonas elongata DSM 2581, complete genomehypothetical protein1e-1788.2
NC_007530:3462624:348558234855823485914333Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein6e-1785.9
NC_020291:4357425:437574443757444376061318Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative pyrophosphatase2e-1684.7
NC_017215:22616:319913199132395405Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Pyrophosphohydrolase, MazG family2e-1684
NC_017214:658821:667610667610668014405Bifidobacterium animalis subsp. lactis BB-12 chromosome, completePyrophosphohydrolase, MazG family2e-1684
NC_002939:1480474:148142714814271481783357Geobacter sulfurreducens PCA, complete genomehypothetical protein9e-1682
NC_016593:1466226:147830014783001478629330Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeMazG nucleotide pyrophosphohydrolase1e-1582
NC_012815:23000:319623196232285324Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeMazG nucleotide pyrophosphohydrolase domain protein2e-1581.3
NC_017217:23000:319623196232285324Bifidobacterium animalis subsp. lactis V9 chromosome, completeMazG nucleotide pyrophosphohydrolase domain-containing protein2e-1581.3
NC_017216:22454:318293182932161333Bifidobacterium animalis subsp. lactis BLC1, complete genomeMazG nucleotide pyrophosphohydrolase domain protein2e-1581.3
NC_021184:4312000:431694243169424317277336Desulfotomaculum gibsoniae DSM 7213, complete genomeputative pyrophosphatase2e-1581.3
NC_012814:23000:319623196232285324Bifidobacterium animalis subsp. lactis Bl-04, complete genomeMazG nucleotide pyrophosphohydrolase domain protein2e-1581.3
NC_011835:23204:319933199332292300Bifidobacterium animalis subsp. lactis AD011 chromosome, completepyrophosphatase2e-1580.9
NC_014307:1:346033460335007405Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein3e-1580.1
NC_014298:251783:272434272434272781348Halalkalicoccus jeotgali B3 plasmid 1, complete sequencehypothetical protein1e-1478.6
NC_013714:1521404:153381315338131534136324Bifidobacterium dentium Bd1, complete genomeMazG nucleotide pyrophosphohydrolase2e-1477.8
NC_006396:2057209:207335620733562073730375Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein2e-1477.4
NC_018681:2447871:245838024583802458784405Nocardia brasiliensis ATCC 700358 chromosome, complete genomeMazG nucleotide pyrophosphohydrolase4e-1476.6
NC_015152:2831566:283765828376582838206549Spirochaeta sp. Buddy chromosome, complete genomehelix-turn-helix domain protein5e-1476.3
NC_020291:3973084:399133439913343991651318Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMazG nucleotide pyrophosphohydrolase2e-1374.7
NC_008789:1393526:140808514080851408447363Halorhodospira halophila SL1, complete genomeMazG nucleotide pyrophosphohydrolase5e-1373.2
NC_013665:1591081:163659316365931636961369Methanocella paludicola SANAE, complete genomehypothetical protein2e-1270.9
NC_014166:228293:237275237275237622348Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehypothetical protein9e-1268.9
NC_015052:1094825:110368711036871104067381Bifidobacterium longum subsp. infantis 157F, complete genomepyrophosphohydrolase2e-1167.4
NC_017219:1622050:163277416327741633154381Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative pyrophosphohydrolase2e-1167.4
NC_011593:1622260:163297516329751633364390Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,MazG nucleotide pyrophosphohydrolase2e-1167.4
NC_020272:84227:981519815198456306Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein5e-1166.6
NC_017098:986428:992470992470992874405Spirochaeta africana DSM 8902 chromosome, complete genomeputative pyrophosphatase7e-1165.9
NC_017221:1222963:123381612338161234196381Bifidobacterium longum subsp. longum KACC 91563 chromosome,putative pyrophosphatase1e-1065.1
NC_010816:621849:634432634432634812381Bifidobacterium longum DJO10A, complete genomePutative pyrophosphatase1e-1064.7
NC_014914:1327245:134575413457541346047294Taylorella equigenitalis MCE9 chromosome, complete genomepyrophosphatase1e-0962
NC_020388:1618396:163313616331361633483348Natronomonas moolapensis 8.8.11 complete genomeMazG domain protein2e-0961.2
NC_012673:2064298:208450420845042084824321Exiguobacterium sp. AT1b, complete genomeMazG nucleotide pyrophosphohydrolase4e-0960.1
NC_012883:1603744:160374416037441604496753Thermococcus sibiricus MM 739, complete genomeNucleotide pyrophosphohydrolase9e-0958.9