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Query: NC_004129:4368356:4385268 Pseudomonas fluorescens Pf-5, complete genome

Start: 4385268, End: 4385468, Length: 201

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3116500:312165731216573121848192Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein8e-1269.3
NC_015379:4691868:469626246962624696453192Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-1063.2
NC_015733:2720183:275624427562442756438195Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-0755.1