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Query: NC_004129:4368356:4374917 Pseudomonas fluorescens Pf-5, complete genome

Start: 4374917, End: 4375717, Length: 801

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:3116500:313049831304983131304807Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein3e-74278
NC_011770:1431740:144854114485411449338798Pseudomonas aeruginosa LESB58, complete genomehypothetical protein7e-45180
NC_012214:1974500:198420719842071984953747Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein6e-27121
NC_014722:846084:858438858438859151714Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-25116
NC_013446:3034486:303879130387913039570780Comamonas testosteroni CNB-2, complete genomehypothetical protein8e-2097.8
NC_015850:1279372:129484012948401295673834Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein1e-1170.5