Pre_GI: BLASTP Hits

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Query: NC_004129:4368356:4373747 Pseudomonas fluorescens Pf-5, complete genome

Start: 4373747, End: 4374337, Length: 591

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009256:1253384:126573612657361266308573Burkholderia vietnamiensis G4 chromosome 1, complete sequencebacteriophage lambda NinG family protein2e-46184
NC_010002:2110953:212876221287622129337576Delftia acidovorans SPH-1, complete genomeLambda NinG family protein5e-24110
NC_010002:3509506:354113835411383541734597Delftia acidovorans SPH-1, complete genomeLambda NinG family protein1e-21102
NC_010002:4508467:450846745084674509042576Delftia acidovorans SPH-1, complete genomeLambda NinG family protein2e-23108
NC_015968:3301958:330771033077103308327618Enterobacter asburiae LF7a chromosome, complete genomeLambda NinG family protein5e-27120
NC_009778:2993218:300862630086263009237612Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-34144
NC_014306:3524980:356223735622373562815579Erwinia billingiae Eb661, complete genomephage NinG protein4e-28124
NC_012759:4132527:414844741484474148644198Escherichia coli BW2952 chromosome, complete genomeProtein ninG2e-0962.4
NC_013364:3312379:333234333323433332948606Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-34144
NC_013364:1183000:120154012015401202145606Escherichia coli O111:H- str. 11128, complete genomeputative recombination endonuclease3e-31134
NC_013364:2645438:264543826454382646040603Escherichia coli O111:H- str. 11128, complete genomeputative recombination endonuclease9e-33139
NC_013364:2898964:291176429117642912366603Escherichia coli O111:H- str. 11128, complete genomeputative NinG protein2e-32138
NC_002655:1332961:135028313502831350888606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W5e-31134
NC_002655:3538656:355636735563673556567201Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y2e-0962.4
NC_011353:3573641:359319035931903593801612Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage Lambda NinG protein4e-31134
NC_002695:3468873:348904434890443489655612Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-31134
NC_013008:3525428:354802935480293548640612Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein4e-31134
NC_013361:3287671:328913732891373289742606Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-32137
NC_013361:3112023:312179931217993122401603Escherichia coli O26:H11 str. 11368 chromosome, complete genomerecombination endonuclease2e-32138
NC_013361:1558423:157775415777541578359606Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-31134
NC_013941:975353:993422993422994045624Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNinG protein1e-32139
NC_011740:2072173:210365321036532104264612Escherichia fergusonii ATCC 35469, complete genomeProtein ninG from prophage1e-33142
NC_007146:1405459:142410914241091424696588Haemophilus influenzae 86-028NP, complete genomehypothetical protein2e-24111
NC_014922:825396:844430844430845017588Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein2e-24112
NC_009567:904922:908970908970909581612Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein6e-25114
NC_016612:3314846:333152633315263332119594Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-1477.4
NC_011283:4212000:421210142121014212739639Klebsiella pneumoniae 342 chromosome, complete genomeninG protein4e-23107
NC_016845:1285435:130267813026781303316639Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ninG protein2e-23108
NC_011770:1431740:144953814495381450119582Pseudomonas aeruginosa LESB58, complete genomeninG protein5e-55213
NC_011770:2690501:271063327106332711274642Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-39160
NC_012660:3116500:313176831317683132346579Pseudomonas fluorescens SBW25 chromosome, complete genomerecombination Protein ninG2e-72271
NC_021066:2226826:223555422355542236135582Raoultella ornithinolytica B6, complete genomephage NinG protein1e-24113
NC_014738:2094000:212359321235932124021429Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,lambda ning family protein2e-1788.6
NC_017045:119046:128842128842129270429Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,lambda ning family protein2e-1788.6
NC_011080:2761403:276374527637452764356612Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage Lambda NinG protein2e-1582.4
NC_016860:364981:384650384650385261612Salmonella enterica subsp. enterica serovar Typhimurium strprotein NinG from prophage3e-33141
NC_016856:2812905:281524728152472815858612Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1685.9
NC_017046:2756000:276077827607782761389612Salmonella enterica subsp. enterica serovar Typhimurium str. 798ninG2e-1789
NC_015152:1994659:200244320024432002898456Spirochaeta sp. Buddy chromosome, complete genomeLambda NinG family protein2e-0962.4