Pre_GI: BLASTP Hits

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Query: NC_004129:4368356:4369644 Pseudomonas fluorescens Pf-5, complete genome

Start: 4369644, End: 4370105, Length: 462

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:2387312:238954823895482390003456Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-49194
NC_009792:1770106:177167417716741772162489Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-47186
NC_014562:983398:100672210067221007180459Pantoea vagans C9-1 chromosome, complete genomehypothetical protein3e-43173
NC_021066:2226826:222985522298552230343489Raoultella ornithinolytica B6, complete genomehypothetical protein1e-40165
NC_016845:1285435:130773213077321308109378Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-29125
NC_014839:170000:180411180411180881471Pantoea sp. At-9b plasmid pPAT9B02, complete sequence9e-28122
NC_010404:55908:769577695777208252Acinetobacter baumannii plasmid p3ABAYE, complete sequence8e-1062.8