Some Help

Query: NC_004129:4368356:4369644 Pseudomonas fluorescens Pf-5, complete genome

Start: 4369644, End: 4370105, Length: 462

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:2387312:238954823895482390003456Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-49194
NC_009792:1770106:177167417716741772162489Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-47186
NC_014562:983398:100672210067221007180459Pantoea vagans C9-1 chromosome, complete genomehypothetical protein3e-43173
NC_021066:2226826:222985522298552230343489Raoultella ornithinolytica B6, complete genomehypothetical protein1e-40165
NC_016845:1285435:130773213077321308109378Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-29125
NC_014839:170000:180411180411180881471Pantoea sp. At-9b plasmid pPAT9B02, complete sequence9e-28122
NC_010404:55908:769577695777208252Acinetobacter baumannii plasmid p3ABAYE, complete sequence8e-1062.8