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Query: NC_004129:4368356:4368356 Pseudomonas fluorescens Pf-5, complete genome

Start: 4368356, End: 4369657, Length: 1302

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:2422083:2441586244158624428961311Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein0662
NC_013850:2182337:2215474221547422167781305Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF2640636
NC_015663:4522109:4523538452353845248421305Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-180632
NC_009648:1541699:1570731157073115720351305Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-180631
NC_008563:1475500:1490077149007714913871311Escherichia coli APEC O1, complete genomeputative phage terminase2e-179628
NC_020063:2565605:2566995256699525683021308Enterobacteriaceae bacterium strain FGI 57, complete genomeTerminase-like family2e-176619
NC_002927:2338549:2353282235328223545591278Bordetella bronchiseptica RB50, complete genomeputative phage terminase2e-140498
NC_002927:3716894:3745069374506937463461278Bordetella bronchiseptica RB50, complete genomeputative phage terminase2e-140498
NC_016514:2476359:2491529249152924939732445Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein9e-32138