Pre_GI: BLASTP Hits

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Query: NC_004129:4333302:4341320 Pseudomonas fluorescens Pf-5, complete genome

Start: 4341320, End: 4341841, Length: 522

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4999946:501525750152575015799543Pseudomonas fluorescens F113 chromosome, complete genomephage protein6e-36150
NC_015379:4630367:465525546552554655770516Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage lysis protein1e-26119
NC_004129:2234851:224061922406192241140522Pseudomonas fluorescens Pf-5, complete genomephage protein, putative6e-1786.7
NC_015733:1976752:198296319829631983523561Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-1684.7
NC_017986:4124335:413047141304714131025555Pseudomonas putida ND6 chromosome, complete genomephage protein1e-1479