Pre_GI: BLASTP Hits

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Query: NC_004129:2609189:2623901 Pseudomonas fluorescens Pf-5, complete genome

Start: 2623901, End: 2624587, Length: 687

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007498:1611986:1627413162741316287531341Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein4e-35148
NC_013166:194614:203464203464204072609Kangiella koreensis DSM 16069, complete genomehypothetical protein1e-36153
NC_014550:615609:615609615609616499891Arthrobacter arilaitensis Re117, complete genomehypothetical protein1e-1376.6
NC_015167:2498666:251140025114002512026627Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein2e-1996.3
NC_018691:359695:377050377050377682633Alcanivorax dieselolei B5 chromosome, complete genomeN-methyl-D-aspartate receptor NMDAR2C subunit7e-40163