Pre_GI: BLASTP Hits

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Query: NC_004129:2609189:2614392 Pseudomonas fluorescens Pf-5, complete genome

Start: 2614392, End: 2615327, Length: 936

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014311:1635408:164346416434641644336873Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein4e-38158
NC_014310:94645:1088421088421098941053Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein8e-30131
NC_008570:1986466:199487319948731995862990Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-1584
NC_013716:3708415:372607037260703726837768Citrobacter rodentium ICC168, complete genomehypothetical protein8e-1167.8
NC_013716:3708415:372728137272813728048768Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1067.4
NC_014310:1338936:134976113497611350675915Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransmembrane protein2e-0963.5
NC_016830:952342:968253968253969110858Pseudomonas fluorescens F113 chromosome, complete genometransmembrane protein2e-0963.2
NC_011134:1360122:137491513749151375610696Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical protein2e-0757
NC_003296:1341353:135085613508561351773918Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN2e-0756.6
NC_015164:3727500:374569637456963746397702Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein8e-0754.7
NC_015846:531984:544880544880545662783Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein1e-0654.3
NC_018691:2288000:2289015228901522901631149Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein2e-0653.1
NC_015164:493159:501285501285502007723Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein4e-0652.4
NC_015164:3759959:378056337805633781300738Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein7e-0651.6
NC_015376:1752883:1762114176211417634481335Burkholderia gladioli BSR3 chromosome chromosome 2, completehypothetical protein8e-0651.2
NC_009012:3354477:3373261337326133744991239Clostridium thermocellum ATCC 27405, complete genomehypothetical protein1e-0551.2