Pre_GI: BLASTP Hits

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Query: NC_004129:2440744:2459639 Pseudomonas fluorescens Pf-5, complete genome

Start: 2459639, End: 2460823, Length: 1185

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007298:1129889:1146638114663811478881251Dechloromonas aromatica RCB, complete genomehypothetical protein1e-23110
NC_010506:3585533:3594790359479035959891200Shewanella woodyi ATCC 51908, complete genomehypothetical protein4e-1789.4