Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:2328491:2355436 Pseudomonas fluorescens Pf-5, complete genome

Start: 2355436, End: 2356662, Length: 1227

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015064:1984662:2008989200898920102211233Acidobacterium sp. MP5ACTX9 chromosome, complete genomemajor facilitator superfamily MFS_13e-47189
NC_012483:3529895:3545408354540835466791272Acidobacterium capsulatum ATCC 51196, complete genometransporter, major facilitator family5e-47188
NC_013854:330543:3445383445383457641227Azospirillum sp. B510, complete genomeMFS general substrate transporter4e-28125
NC_012914:5194791:5209513520951352107211209Paenibacillus sp. JDR-2, complete genomemajor facilitator superfamily MFS_13e-25116
UCMB5137:2128500:2152994215299421541901197Bacillus atrophaeus UCMB-5137YybF17e-23108
NC_014639:2169277:2189189218918921903851197Bacillus atrophaeus 1942 chromosome, complete genomeYybF1 protein3e-22106
CP002207:2169277:2189189218918921903851197Bacillus atrophaeus 1942, complete genomeYybF13e-22106
NC_007645:6858465:6861012686101268622171206Hahella chejuensis KCTC 2396, complete genomePermease of the major facilitator superfamily3e-2099.8
NC_014976:2175667:2175667217566721768811215Bacillus subtilis BSn5 chromosome, complete genomeputative permease1e-1894.7
NC_000964:4164683:4178187417818741794011215Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-1894.4
NC_019896:17873:3686536865380791215Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YybF3e-1893.2
NC_011761:2067695:2078182207818220794981317Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completemajor facilitator family transporter2e-1687.4
NC_014215:1841064:1841064184106418423021239Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Major facilitator family protein transporter2e-1687.4
NC_011083:403022:4185364185364197681233Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative permease3e-1686.7
NC_011205:371001:3747993747993760311233Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853permease3e-1686.7
NC_016856:365665:3720943720943733261233Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease3e-1686.7
NC_016860:397138:4128004128004140321233Salmonella enterica subsp. enterica serovar Typhimurium strputative permease3e-1686.7
NC_017046:366905:3708843708843721161233Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease/MSF transporter3e-1686.7
NC_003197:367430:3713043713043726411338Salmonella typhimurium LT2, complete genomeputative permease3e-1686.7
NC_016857:366908:3707823707823721191338Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative permease3e-1686.7
NC_006905:401154:4158424158424171791338Salmonella enterica subsp. enterica serovar Choleraesuis strputative permease3e-1686.7
NC_011294:346915:3507073507073519451239Salmonella enterica subsp. enterica serovar Enteritidis strpermease/MSF transporter3e-1686.7
NC_016863:367404:3713773713773726151239Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease3e-1686.7
NC_016810:366908:3708363708363721191284Salmonella enterica subsp. enterica serovar Typhimurium strputative permease/MSF transporter3e-1686.3
NC_009725:3878862:3878862387886238800641203Bacillus amyloliquefaciens FZB42, complete genomeYybF3e-1583.2
NC_019842:3921424:3922147392214739233491203Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-1481.6
NC_020541:2487427:2510965251096525122121248Rhodanobacter sp. 2APBS1, complete genomearabinose efflux permease family protein1e-1378.2
NC_016830:530397:5309575309575322341278Pseudomonas fluorescens F113 chromosome, complete genomemajor facilitator superfamily permease3e-1376.6
NC_018681:2176000:2197763219776321990041242Nocardia brasiliensis ATCC 700358 chromosome, complete genomemajor facilitator superfamily protein3e-1376.6
NC_021171:1661923:1679048167904816802591212Bacillus sp. 1NLA3E, complete genomemajor facilitator superfamily protein1e-1171.6
NC_013757:3100515:3105366310536631065921227Geodermatophilus obscurus DSM 43160, complete genomemajor facilitator superfamily MFS_15e-0859.3
NC_014541:643604:6509636509636521531191Ferrimonas balearica DSM 9799 chromosome, complete genomemajor facilitator superfamily MFS_19e-0858.5
NC_014210:2638773:2642788264278826440741287Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,major facilitator superfamily MFS_12e-0654.3
NC_009434:608765:6330036330036344601458Pseudomonas stutzeri A1501, complete genomemajor facilitator family transporter5e-0652.4