Pre_GI: BLASTP Hits

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Query: NC_004129:2328491:2350955 Pseudomonas fluorescens Pf-5, complete genome

Start: 2350955, End: 2351797, Length: 843

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010508:1705500:171193217119321712828897Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceCurculin domain protein (mannose-binding) lectin1e-1997.4
NC_008060:1182378:118873111887311189627897Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceCurculin-like (mannose-binding) lectin3e-1995.9
NC_008542:1727000:173341617334161734312897Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceCurculin domain protein (mannose-binding) lectin3e-1995.9
NC_008537:130278:148635148635149315681Arthrobacter sp. FB24 plasmid 1, complete sequenceCurculin domain protein (mannose-binding) lectin2e-1893.2
NC_010508:1705500:171339717133971714209813Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceCurculin domain protein (mannose-binding) lectin3e-0962.4
NC_008060:1182378:119019611901961191008813Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceCurculin-like (mannose-binding) lectin3e-0962.4
NC_008542:1727000:173488117348811735693813Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceCurculin domain protein (mannose-binding) lectin3e-0962.4
NC_007974:1007834:1015950101595010185082559Ralstonia metallidurans CH34 chromosome 2, complete sequenceCurculin-like (mannose-binding) lectin6e-0961.6
NC_019673:189487:2079242079242094411518Saccharothrix espanaensis DSM 44229 complete genomeAqualysin-1 like protein2e-0653.1