Pre_GI: BLASTP Hits

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Query: NC_004129:2328491:2333442 Pseudomonas fluorescens Pf-5, complete genome

Start: 2333442, End: 2333636, Length: 195

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:4558122:458893145889314589125195Pseudomonas fluorescens SBW25 chromosome, complete genome50S ribosomal protein L354e-29126
NC_002947:2809591:281211028121102812319210Pseudomonas putida KT2440, complete genome50S ribosomal protein L352e-27120
NC_009512:3618055:363556836355683635762195Pseudomonas putida F1, complete genomeribosomal protein L353e-27120
NC_009434:2577717:258897525889752589169195Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L359e-26115
NC_015740:2407500:244604024460402446234195Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete50S ribosomal protein L359e-26115
NC_015410:3209954:322573132257313225925195Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L352e-25114
NC_021150:2026496:203680720368072037001195Azotobacter vinelandii CA6, complete genome50S ribosomal protein L352e-24111
NC_012560:2026483:203679420367942036988195Azotobacter vinelandii DJ, complete genome50S ribosomal protein L352e-24111
NC_002516:3079850:310402331040233104217195Pseudomonas aeruginosa PAO1, complete genome50S ribosomal protein L352e-23107
NC_011770:2499432:249943224994322499626195Pseudomonas aeruginosa LESB58, complete genome50S ribosomal protein L352e-23107
NC_008463:2467219:246975424697542469948195Pseudomonas aeruginosa UCBPP-PA14, complete genome50S ribosomal protein L352e-23107
NC_009656:2512733:251526825152682515462195Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L352e-23107
NC_018080:2288700:229123522912352291429195Pseudomonas aeruginosa DK2 chromosome, complete genome50S ribosomal protein L352e-23107
NC_017506:1100679:110325111032511103433183Marinobacter adhaerens HP15 chromosome, complete genome50S ribosomal protein L351e-1478.2
NC_014965:1428902:143357114335711433765195Vibrio vulnificus MO6-24/O chromosome I, complete sequence50S ribosomal protein L35p2e-1477.8
NC_018691:3525430:357235035723503572544195Alcanivorax dieselolei B5 chromosome, complete genome50S ribosomal protein L356e-1476.3
NC_002506:298868:309079309079309273195Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete50S ribosomal protein L352e-1374.7
NC_012580:301500:310278310278310472195Vibrio cholerae M66-2 chromosome II, complete sequence50S ribosomal protein L352e-1374.7
NC_012583:335000:343948343948344142195Vibrio cholerae O395 chromosome chromosome II, complete sequenceribosomal protein L352e-1374.7
NC_012667:1045782:105107310510731051267195Vibrio cholerae MJ-1236 chromosome 2, complete genome50S ribosomal protein L352e-1374.7
NC_016446:26500:355243552435718195Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete50S ribosomal protein L352e-1374.7
NC_016945:300000:309046309046309240195Vibrio cholerae IEC224 chromosome II, complete sequence50S ribosomal protein L352e-1374.7
NC_017514:1491235:150332515033251503618294Neisseria meningitidis M01-240149 chromosome, complete genome50S ribosomal protein L352e-1271.2
NC_017516:1535904:155145115514511551744294Neisseria meningitidis H44/76 chromosome, complete genome50S ribosomal protein L352e-1271.2
NC_017518:828662:831261831261831458198Neisseria meningitidis NZ-05/33 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_017515:1527461:153955115395511539748198Neisseria meningitidis M04-240196 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_017505:751836:757544757544757741198Neisseria meningitidis alpha710 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_013016:656000:665067665067665264198Neisseria meningitidis alpha14 chromosome, complete genome50S ribosomal protein L353e-1270.5
NC_003112:744476:753642753642753839198Neisseria meningitidis MC58, complete genome50S ribosomal protein L353e-1270.5
NC_015731:867377:912826912826913023198Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L352e-1168.2
NC_015144:1333179:134179413417941341991198Weeksella virosa DSM 16922 chromosome, complete genome50S ribosomal protein L352e-1168.2
NC_013959:1723037:174413517441351744332198Sideroxydans lithotrophicus ES-1 chromosome, complete genomeribosomal protein L352e-1167.8
NC_010830:718614:721330721330721524195Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1167.8
NC_015638:23654:397243972439921198Lacinutrix sp. 5H-3-7-4 chromosome, complete genome50S ribosomal protein L352e-1167.8
NC_004757:1021355:104129910412991041496198Nitrosomonas europaea ATCC 19718, complete genome50S ribosomal protein L357e-1165.9
NC_014972:1621850:162442616244261624623198Desulfobulbus propionicus DSM 2032 chromosome, complete genome50S ribosomal protein L35P7e-1165.9
NC_014472:294775:311945311945312142198Flavobacteriales bacterium HTCC2170 chromosome, complete genomeribosomal protein L359e-1165.5
NC_015496:2371163:238037323803732380570198Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeribosomal protein L351e-1065.5
NC_008702:1153344:116527511652751165472198Azoarcus sp. BH72, complete genome50S ribosomal protein L352e-1064.7
NC_007517:1561466:158191015819101582107198Geobacter metallireducens GS-15, complete genomeribosomal protein L352e-1064.7
NC_007498:1666242:166878716687871668984198Pelobacter carbinolicus DSM 2380, complete genomeribosomal protein L352e-1064.3
NC_019903:175481:175941175941176138198Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,50S ribosomal protein L353e-1063.9
NC_013166:1841446:185880218588021858999198Kangiella koreensis DSM 16069, complete genomeribosomal protein L353e-1063.5
NC_008781:2981868:299389729938972994100204Polaromonas naphthalenivorans CJ2, complete genomeribosomal protein L354e-1063.5
NC_015167:2700218:270356027035602703748189Cellulophaga lytica DSM 7489 chromosome, complete genome50S ribosomal protein L359e-1062.4
NC_007298:2856104:287188528718852872082198Dechloromonas aromatica RCB, complete genome50S ribosomal protein L352e-0961.6
NC_007086:1988000:198807219880721988269198Xanthomonas campestris pv. campestris str. 8004, complete genome50S ribosomal protein L351e-0961.6
NC_003902:2903493:292295029229502923147198Xanthomonas campestris pv. campestris str. ATCC 33913, complete50S ribosomal protein L351e-0961.6
NC_017271:2906000:292547629254762925673198Xanthomonas campestris pv. raphani 756C chromosome, complete50S ribosomal protein L351e-0961.6
NC_015222:2089767:210094021009402101137198Nitrosomonas sp. AL212 chromosome, complete genome50S ribosomal protein L352e-0961.2
NC_015565:1163148:117694611769461177140195Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete50S ribosomal protein L352e-0961.2
NC_016002:1326500:132945913294591329656198Pseudogulbenkiania sp. NH8B, complete genome50S ribosomal protein L353e-0960.8
NC_002939:1634843:166463116646311664828198Geobacter sulfurreducens PCA, complete genomeribosomal protein L353e-0960.5
NC_014910:2585747:259225325922532592456204Alicycliphilus denitrificans BC chromosome, complete genomeribosomal protein l357e-0959.3
NC_008609:2446246:248854324885432488740198Pelobacter propionicus DSM 2379, complete genomeribosomal protein L357e-0959.3
NC_007484:1229899:125080212508021250999198Nitrosococcus oceani ATCC 19707, complete genome50S ribosomal protein L359e-0958.9
NC_011992:1505106:151819715181971518400204Acidovorax ebreus TPSY, complete genomeribosomal protein L352e-0858.2
NC_014931:4234288:425729542572954257498204Variovorax paradoxus EPS chromosome, complete genomeribosomal protein L352e-0857.8
NC_014371:177536:206019206019206216198Prevotella melaninogenica ATCC 25845 chromosome chromosome II,ribosomal protein L353e-0857.4
NC_014004:66631:871738717387370198Candidatus Sulcia muelleri DMIN chromosome, complete genomeLSU ribosomal protein L35P4e-0856.6
NC_017046:1358531:137168513716851371897213Salmonella enterica subsp. enterica serovar Typhimurium str. 79850S ribosomal protein L356e-0856.2
NC_016857:1358456:137161013716101371822213Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/7450S ribosomal protein L356e-0856.2
NC_007613:1353500:135350413535041353701198Shigella boydii Sb227, complete genome50S ribosomal subunit protein A8e-0855.8
NC_004631:1271500:128321512832151283412198Salmonella enterica subsp. enterica serovar Typhi Ty2, complete50S ribosomal protein L358e-0855.8
NC_003197:1401603:141477214147721414969198Salmonella typhimurium LT2, complete genome50S ribosomal protein L358e-0855.8
NC_020063:2011019:202502720250272025224198Enterobacteriaceae bacterium strain FGI 57, complete genomeLSU ribosomal protein L35P8e-0855.8
NC_011083:1408202:141981514198151420012198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ribosomal protein L358e-0855.8
NC_006511:1579776:158387115838711584068198Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L358e-0855.8
NC_013850:2103469:214267121426712142868198Klebsiella variicola At-22 chromosome, complete genomeribosomal protein L358e-0855.8
NC_010658:1772994:179153417915341791731198Shigella boydii CDC 3083-94, complete genomeribosomal protein L358e-0855.8
NC_003198:1693623:169771816977181697915198Salmonella enterica subsp. enterica serovar Typhi str. CT18,50S ribosomal protein L358e-0855.8
NC_010102:1703172:170726717072671707464198Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0855.8
NC_011205:1938574:194266919426691942866198Salmonella enterica subsp. enterica serovar Dublin str. CT_0202185350S ribosomal protein L358e-0855.8
NC_016863:1359769:137293813729381373135198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L358e-0855.8
NC_016860:1399290:141245914124591412656198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L358e-0855.8
NC_016856:1411579:142474814247481424945198Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S50S ribosomal protein L358e-0855.8
NC_016832:1269018:128218812821881282385198Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,50S ribosomal subunit protein A8e-0855.8
NC_016831:1166868:118003411800341180231198Salmonella enterica subsp. enterica serovar Gallinarum/pullorum50S ribosomal subunit protein L358e-0855.8
NC_016810:1358456:137162513716251371822198Salmonella enterica subsp. enterica serovar Typhimurium str50S ribosomal protein L358e-0855.8
NC_011294:1810285:181438018143801814577198Salmonella enterica subsp. enterica serovar Enteritidis str50S ribosomal protein L358e-0855.8
NC_011283:2185462:220926222092622209459198Klebsiella pneumoniae 342 chromosome, complete genome50S ribosomal protein L358e-0855.8
NC_011274:1850086:185418118541811854378198Salmonella enterica subsp. enterica serovar Gallinarum str. 287/9150S ribosomal protein L358e-0855.8
NC_014448:626909:636963636963637151189Mycoplasma hyorhinis HUB-1 chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_016829:624971:635024635024635212189Mycoplasma hyorhinis GDL-1 chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_017519:672462:677567677567677755189Mycoplasma hyorhinis MCLD chromosome, complete genome50S ribosomal protein L351e-0755.5
NC_012912:2216749:223572522357252235922198Dickeya zeae Ech1591, complete genomeribosomal protein L351e-0755.1
NC_012880:2425330:243053424305342430731198Dickeya dadantii Ech703, complete genomeribosomal protein L351e-0755.1
NC_014228:1712339:175503917550391755236198Xenorhabdus nematophila ATCC 19061, complete genome50S ribosomal subunit protein A1e-0755.1
NC_014500:2589089:259329725932972593494198Dickeya dadantii 3937 chromosome, complete genome50S ribosomal subunit protein L352e-0754.7
NC_014098:2332938:233484023348402335040201Bacillus tusciae DSM 2912 chromosome, complete genomeribosomal protein L352e-0754.3
NC_011772:4487378:450482845048284505028201Bacillus cereus G9842, complete genomeribosomal protein L352e-0754.3
NC_011979:3712845:371687437168743717071198Geobacter sp. FRC-32, complete genomeribosomal protein L352e-0754.3
NC_009483:3024115:305170930517093051906198Geobacter uraniireducens Rf4 chromosome, complete genome50S ribosomal protein L353e-0753.9
NC_015844:3524175:352639835263983526595198Zobellia galactanivorans, complete genome50S ribosomal protein L351e-0651.6
NC_014364:2751662:277144127714412771641201Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeribosomal protein L354e-0650.4
NC_014328:3747973:376721637672163767413198Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L354e-0650.1