Pre_GI: BLASTP Hits

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Query: NC_004129:2234851:2241205 Pseudomonas fluorescens Pf-5, complete genome

Start: 2241205, End: 2242950, Length: 1746

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:1292573:1297681129768112992581578Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-118427
NC_018868:4174794:4183504418350441848981395Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein2e-64247
NC_015635:4864349:4869208486920848707701563Microlunatus phosphovorus NM-1, complete genomehypothetical protein1e-59231
NC_015637:819233:8253258253258270191695Vibrio anguillarum 775 chromosome chromosome II, complete sequencehypothetical protein1e-39164