Pre_GI: BLASTP Hits

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Query: NC_004129:2234851:2237427 Pseudomonas fluorescens Pf-5, complete genome

Start: 2237427, End: 2238272, Length: 846

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4999946:501770450177045018549846Pseudomonas fluorescens F113 chromosome, complete genomephage protein U1e-117422
NC_004578:3817330:383293838329383833702765Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-106385
NC_017986:4124335:412773441277344128579846Pseudomonas putida ND6 chromosome, complete genomepyocin R2 PP, tail formation protein3e-102371
NC_015733:1976752:198025019802501981095846Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, tail formation protein1e-94345
NC_017033:1089579:109284410928441093686843Frateuria aurantia DSM 6220 chromosome, complete genomephage protein U2e-67255
NC_015381:3091500:311565431156543116532879Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein1e-33143
NC_012724:3070386:308492230849223085800879Burkholderia glumae BGR1 chromosome 1, complete genomePhage P2 GpU family protein2e-33142
NC_015381:2109500:211267021126702113425756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein3e-33142
NC_015381:3457784:347469734746973475452756Burkholderia gladioli BSR3 chromosome 1, complete sequencePhage P2 GpU family protein1e-32140
NC_008390:2018201:203723820372382038116879Burkholderia cepacia AMMD chromosome 1, complete sequencephage P2 GpU family protein6e-31134
NC_006576:856014:873361873361874281921Synechococcus elongatus PCC 6301, complete genomehypothetical protein2e-23109
NC_007604:743738:746590746590747510921Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-23109
NC_012881:2310141:232552323255232325903381Desulfovibrio salexigens DSM 2638, complete genomeP2 GpU family protein1e-1377
NC_009832:2211154:223880522388052239263459Serratia proteamaculans 568, complete genomeP2 GpU family protein1e-1273.9
NC_015563:4959843:496628349662834966741459Delftia sp. Cs1-4 chromosome, complete genomeP2 GpU family protein8e-1270.9
NC_011415:2248417:226432222643222264750429Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1170.5
NC_021150:3771860:378625037862503786693444Azotobacter vinelandii CA6, complete genomePhage P2 GpU protein1e-0964.3
NC_012560:3771861:378625137862513786694444Azotobacter vinelandii DJ, complete genomePhage P2 GpU protein1e-0964.3
NC_003902:3544743:354808035480803548481402Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related tail protein3e-0962.8
NC_014323:961825:978063978063978590528Herbaspirillum seropedicae SmR1 chromosome, complete genomebacteriophage P2 phage-related tail U protein4e-0962
NC_008781:3508784:351572135157213516170450Polaromonas naphthalenivorans CJ2, complete genomephage P2 GpU family protein2e-0859.7
NC_012416:753500:757164757164757580417Wolbachia sp. wRi, complete genometail protein U, putative2e-0859.7
NC_007963:1552761:156822515682251568668444Chromohalobacter salexigens DSM 3043, complete genomephage P2 GpU4e-0858.9
NC_002978:549454:552805552805553155351Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage P2W3, tail protein U, putative3e-0755.8
NC_010981:1371265:141166214116621412009348Wolbachia pipientis, complete genomephage tail protein GpU5e-0755.1
NC_009801:995396:101492410149241015403480Escherichia coli E24377A, complete genomephage protein gpU9e-0754.3
NC_015410:2351464:238451223845122384952441Pseudomonas mendocina NK-01 chromosome, complete genomephage P2 GpU protein1e-0653.9
NC_007613:1353500:137033413703341370822489Shigella boydii Sb227, complete genomeputative tail protein2e-0653.5
NC_009436:1466580:148955414895541490039486Enterobacter sp. 638, complete genomephage P2 GpU family protein2e-0653.1
NC_012724:1914740:192413919241391924636498Burkholderia glumae BGR1 chromosome 1, complete genomePhage protein U3e-0652.8
NC_009648:3803622:380478838047883805267480Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage tail protein3e-0652.8
NC_016816:674171:678437678437678940504Pantoea ananatis LMG 5342, complete genomeP2 GpU family protein3e-0652.4
NC_015856:1182974:118820811882081188765558Collimonas fungivorans Ter331 chromosome, complete genomephage p2 GpU7e-0651.2