Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:2201780:2222393 Pseudomonas fluorescens Pf-5, complete genome

Start: 2222393, End: 2223874, Length: 1482

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:5031819:5032976503297650344571482Pseudomonas fluorescens F113 chromosome, complete genomephage portal lambda family0828
NC_012724:3100430:3101527310152731030171491Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein5e-128458
NC_009659:3103601:3110568311056831121001533Janthinobacterium sp. Marseille chromosome, complete genomephage portal protein4e-110398
NC_010981:314745:3472443472443486621419Wolbachia pipientis, complete genomePutative phage portal protein1e-109397
NC_010981:242500:2566202566202580381419Wolbachia pipientis, complete genomePutative phage portal protein1e-109397
NC_010981:314745:3301403301403315581419Wolbachia pipientis, complete genomePutative phage portal protein1e-109397
NC_010981:1371265:1381740138174013831521413Wolbachia pipientis, complete genomePutative phage portal protein4e-109395
NC_012416:1079661:1098804109880411002221419Wolbachia sp. wRi, complete genomeprophage portal protein, lambda family1e-108393
NC_012416:573202:5923455923455937631419Wolbachia sp. wRi, complete genomeportal protein, lambda family1e-108393
NC_012416:753500:7757377757377771581422Wolbachia sp. wRi, complete genomeportal protein, lambda family6e-106385
NC_010002:3753000:3763916376391637656821767Delftia acidovorans SPH-1, complete genomephage portal protein, lambda family8e-94344
NC_011958:976500:1012885101288510143871503Rhodobacter sphaeroides KD131 chromosome 2, complete genomeBacteriophage capsid protein3e-89329
NC_011420:36272:5467754677561641488Rhodospirillum centenum SW, complete genomephage portal protein, lambda family2e-61236
NC_006138:1735723:1766332176633217678491518Desulfotalea psychrophila LSv54, complete genomesimilar to portal protein GPB of phage lambda3e-61236
NC_014664:3003633:3023547302354730248871341Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomephage portal protein, lambda family1e-53211
NC_014011:1139818:1148538114853811500221485Aminobacterium colombiense DSM 12261 chromosome, complete genomephage portal protein, lambda family6e-47188
NC_020126:2381380:2386474238647423879611488Myxococcus stipitatus DSM 14675, complete genomephage portal protein7e-45181
NC_007494:739403:738429738429739406978Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence2e-44180
NC_007494:714525:738429738429739406978Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence2e-44180
NC_007907:2534462:2534462253446225358861425Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-34147
NC_014632:1112733:1132914113291411344551542Ilyobacter polytropus DSM 2926 chromosome, complete genomephage portal protein, lambda family2e-26120
NC_013960:979556:9858189858189872961479Nitrosococcus halophilus Nc4 chromosome, complete genomephage portal protein, lambda family2e-24114
NC_011770:860944:8866038866038882491647Pseudomonas aeruginosa LESB58, complete genomePutative portal protein2e-23110
NC_016822:1431200:1456668145666814581761509Shigella sonnei 53G, complete genomehypothetical protein2e-21104
NC_009053:553298:5780455780455795651521Actinobacillus pleuropneumoniae L20, complete genomebacteriophage capsid protein7e-21102
NC_010382:3643288:3661217366121736627941578Lysinibacillus sphaericus C3-41, complete genomeportal protein (head protein Gp4)2e-20100
NC_009253:1265474:1281892128189212834871596Desulfotomaculum reducens MI-1 chromosome, complete genomelambda family phage portal protein2e-20100
NC_017047:3085000:3112046311204631134101365Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein9e-2098.6
NC_016629:2784000:2798573279857328001111539Desulfovibrio africanus str. Walvis Bay chromosome, completephage portal protein, lambda family1e-1998.2
NC_011205:1345511:1375774137577413773211548Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage portal protein, lambda family2e-1997.8
NC_011740:4520373:4534672453467245362521581Escherichia fergusonii ATCC 35469, complete genomeputative portal protein (head-tail preconnector protein) from putative prophage3e-1997.1
NC_011751:1859606:1861578186157818631581581Escherichia coli UMN026 chromosome, complete genomeputative portal protein3e-1997.1
NC_008563:5011997:5027194502719450287741581Escherichia coli APEC O1, complete genomeputative capsid protein3e-1997.1
NC_011742:4962008:4977204497720449787841581Escherichia coli S88 chromosome, complete genomeportal protein (head-tail preconnector protein) from prophage3e-1997.1
NC_016831:1734292:1736297173629717378441548Salmonella enterica subsp. enterica serovar Gallinarum/pullorumPutative Prophage Protein2e-1997.1
NC_013361:2138716:2140688214068821421961509Escherichia coli O26:H11 str. 11368 chromosome, complete genomeportal protein5e-1996.3
NC_016612:3314846:3342349334234933438481500Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage portal protein, lambda family8e-1995.5
CU928145:1773642:1776024177602417776041581Escherichia coli 55989 chromosome, complete genomeputative portal protein (head-tail preconnector protein) from putative prophage9e-1995.1
NC_011748:1773642:1776024177602417776041581Escherichia coli 55989, complete genomeputative portal protein (head-tail preconnector protein) from putative prophage9e-1995.1
NC_011770:1456667:1456667145666714583911725Pseudomonas aeruginosa LESB58, complete genomePutative portal protein1e-1895.1
NC_002695:2893951:2914376291437629158781503Escherichia coli O157:H7 str. Sakai, complete genomeputative portal protein8e-1892.4
AP010958:1472506:1471059147105914725611503Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative portal protein6e-1892.4
NC_013353:1472506:1471059147105914725611503Escherichia coli O103:H2 str. 12009, complete genomeportal protein6e-1892.4
NC_013364:3339768:3339768333976833412701503Escherichia coli O111:H- str. 11128, complete genomeputative portal protein8e-1892
NC_002937:2263763:2268224226822422697771554Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeportal protein1e-1791.7
NC_009778:2227627:2256804225680422583241521Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1791.7
NC_011740:2769961:2769961276996127714721512Escherichia fergusonii ATCC 35469, complete genomePutative head-tail preconnector protein from phage origin1e-1791.7
NC_014121:1682638:1703471170347117049701500Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage portal protein, lambda family1e-1791.3
NC_013008:1761165:1761165176116517626671503Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephage portal protein, lambda family3e-1790.1
NC_011353:1761977:1762189176218917636911503Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage portal protein, lambda family3e-1790.1
NC_011751:1377457:1375875137587513774671593Escherichia coli UMN026 chromosome, complete genomeportal protein (Head protein GP4)2e-1687.4
NC_013361:3112023:3112023311202331136151593Escherichia coli O26:H11 str. 11368 chromosome, complete genomeportal protein3e-1687
NC_013941:2425233:2458222245822224598141593Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebacteriophage capsid protein6e-1685.9
NC_013941:1963523:1983917198391719855091593Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebacteriophage capsid protein6e-1685.9
NC_017033:1052000:1077361107736110789621602Frateuria aurantia DSM 6220 chromosome, complete genomephage portal protein, lambda family7e-1685.9
NC_011745:1055354:1055354105535410569461593Escherichia coli ED1a chromosome, complete genomehead protein Gp47e-1685.9
NC_013364:2522888:2554816255481625564081593Escherichia coli O111:H- str. 11128, complete genomeputative portal protein8e-1685.5
NC_004431:1352906:1351324135132413529161593Escherichia coli CFT073, complete genomePutative capsid protein of prophage8e-1685.5
NC_011745:2025725:2045728204572820473201593Escherichia coli ED1a chromosome, complete genomehead protein Gp48e-1685.5
NC_011742:585908:5842965842965859181623Escherichia coli S88 chromosome, complete genomePortal protein (head protein Gp4)9e-1685.5
NC_013941:5317424:5332198533219853337901593Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecapsid protein of prophage1e-1585.1
NC_016613:2160356:2170977217097721725031527Vibrio sp. EJY3 chromosome 1, complete sequencephage portal protein, lambda family protein1e-1585.1
NC_011750:1931384:1952043195204319536351593Escherichia coli IAI39 chromosome, complete genomehead protein Gp49e-1685.1
NC_015873:1193843:1230053123005312316451593Megasphaera elsdenii DSM 20460, complete genomephage portal protein2e-1584.3
NC_016585:417979:4401184401184417311614Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative Portal protein B (GpB) (Minor capsid protein B)2e-1584.3
NC_011353:1195179:1197060119706011986521593Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage portal protein, lambda family4e-1583.2
NC_002655:1909139:1911290191129019128821593Escherichia coli O157:H7 EDL933, complete genomeputative capsid assembly protein of prophage CP-933O5e-1479.3
NC_011094:638552:6700106700106715451536Salmonella enterica subsp. enterica serovar Schwarzengrund strphage portal protein, lambda family protein9e-1478.6
NC_011353:2892265:2906593290659329100633471Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage portal protein, lambda family4e-1376.6
NC_011415:2277559:2277559227755922791301572Escherichia coli SE11 chromosome, complete genomeputative phage capsid structural protein5e-1376.3
NC_002978:234082:2538522538522552691418Wolbachia endosymbiont of Drosophila melanogaster, complete genome1e-1275.1
NC_004431:3040953:3042253304225330438541602Escherichia coli CFT073, complete genomePutative capsid structural protein of prophage1e-1275.1
CP002797:1960000:1981510198151019830841575Escherichia coli NA114, complete genomeputative capsid structural protein1e-1275.1
NC_011750:1565000:1579415157941515810161602Escherichia coli IAI39 chromosome, complete genomePortal protein B (minor capsid protein B) from bacteriophage origin2e-1274.3
NC_013361:2169948:2189530218953021911311602Escherichia coli O26:H11 str. 11368 chromosome, complete genomeportal protein5e-1272.8
NC_002695:2158314:2177825217782521794261602Escherichia coli O157:H7 str. Sakai, complete genomeputative portal protein5e-1272.8
NC_013361:1896446:1896446189644618980471602Escherichia coli O26:H11 str. 11368 chromosome, complete genomeportal protein5e-1272.8
CP002185:1770815:1772115177211517737161602Escherichia coli W, complete genomelambda family phage portal protein1e-1172
NC_011741:1668842:1670142167014216717431602Escherichia coli IAI1 chromosome, complete genomePortal protein; minor capsid protein1e-1171.6
CU928160:1668842:1670142167014216717431602Escherichia coli IAI1 chromosome, complete genomePortal protein; minor capsid protein [Contains: Protein B*] from bacteriophage origin1e-1171.6
NC_013941:699286:7206317206317222321602Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecapsid structural protein of prophage2e-1170.9