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Query: NC_004129:2201780:2219596 Pseudomonas fluorescens Pf-5, complete genome

Start: 2219596, End: 2220168, Length: 573

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:3849835:385186438518643852433570Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein8e-73272
NC_015733:1943385:196100319610031961584582Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-62238
NC_010322:1336231:135339513533951353976582Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-61235
NC_016830:5031819:503668250366825037284603Pseudomonas fluorescens F113 chromosome, complete genometerminase small subunit6e-46183
NC_002947:3404000:342543334254333426044612Pseudomonas putida KT2440, complete genomehypothetical protein6e-43173
NC_017986:5509569:552993855299385530549612Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-41166
NC_005773:2177184:219245721924572193116660Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein5e-23107
NC_008536:2079052:208457320845732085076504Solibacter usitatus Ellin6076, complete genomeputative bacteriophage-related protein3e-0961.6
NC_013722:218847:236084236084236710627Xanthomonas albilineans, complete genomehypothetical protein5e-0960.8