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Query: NC_004129:2201780:2215400 Pseudomonas fluorescens Pf-5, complete genome

Start: 2215400, End: 2215738, Length: 339

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:3849835:385682138568213857420600Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-51201
NC_016830:5031819:504106950410695041587519Pseudomonas fluorescens F113 chromosome, complete genomebacteriophage protein3e-48189
NC_017986:5509569:552562655256265526144519Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-44177