Pre_GI: BLASTP Hits

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Query: NC_004129:2201780:2212968 Pseudomonas fluorescens Pf-5, complete genome

Start: 2212968, End: 2213552, Length: 585

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:5031819:504427550442755044859585Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein7e-64243
NC_004578:3849835:385992938599293860504576Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-37154
NC_008027:3953951:396282339628233963122300Pseudomonas entomophila L48, complete genome3e-0651.6