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Query: NC_004129:2201780:2204289 Pseudomonas fluorescens Pf-5, complete genome

Start: 2204289, End: 2204771, Length: 483

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:945000:949629949629950111483Pseudomonas poae RE*1-1-14, complete genomeanti-anti-sigma factor3e-87320
NC_010501:1868888:187012318701231870605483Pseudomonas putida W619, complete genomeanti-sigma-factor antagonist2e-82303
NC_016830:4639388:465614646561464656628483Pseudomonas fluorescens F113 chromosome, complete genomeprotein StaS8e-82301
NC_008027:3953951:397283339728333973315483Pseudomonas entomophila L48, complete genomeanti-anti-sigma factor1e-81301
NC_010410:3166279:318014931801493180730582Acinetobacter baumannii AYE, complete genomehypothetical protein1e-23108
NC_010611:679862:683767683767684348582Acinetobacter baumannii ACICU, complete genomeAnti-anti-sigma regulatory factor (antagonist of anti-sigma factor)2e-23108