Pre_GI: BLASTP Hits

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Query: NC_004129:2201780:2201780 Pseudomonas fluorescens Pf-5, complete genome

Start: 2201780, End: 2202466, Length: 687

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4639388:465815546581554658844690Pseudomonas fluorescens F113 chromosome, complete genomeVacJ-like lipoprotein precursor7e-107386
NC_020209:945000:947124947124947813690Pseudomonas poae RE*1-1-14, complete genomeVacJ family lipoprotein7e-104376
NC_008027:3953951:397513139751313975838708Pseudomonas entomophila L48, complete genomeVacJ lipoprotein1e-97355
NC_014323:4665610:466876846687684669508741Herbaspirillum seropedicae SmR1 chromosome, complete genomesurface lipoprotein (VacJ) transmembrane protein2e-44179
NC_015497:1287877:130440113044011305168768Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeVacJ family lipoprotein2e-42172
NC_010086:20876:3949839498405111014Burkholderia multivorans ATCC 17616 chromosome 2, completeVacJ family lipoprotein7e-40164
NC_010805:2432167:2434793243479324358061014Burkholderia multivorans ATCC 17616 chromosome 2, completelipoprotein7e-40164
NC_010611:679862:685475685475686374900Acinetobacter baumannii ACICU, complete genomeSurface lipoprotein1e-36153
NC_008463:1912348:194172519417251942528804Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative surface lipoprotein1e-36153
NC_009465:813816:835643835643836329687Candidatus Vesicomyosocius okutanii HA, complete genomesurface lipoprotein VacJ2e-36152
NC_010410:3166279:317812331781233179022900Acinetobacter baumannii AYE, complete genomeputative lipoprotein precursor (VacJ) transmembrane1e-36152
NC_007517:1107408:1107408110740811096512244Geobacter metallireducens GS-15, complete genomeVacJ-like lipoprotein6e-34144
NC_011761:1838000:186490318649031865742840Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completevacJ lipoprotein1e-33143
NC_008577:1579950:158362215836221584407786Shewanella sp. ANA-3 chromosome 1, complete sequenceVacJ family lipoprotein7e-31134
NC_008700:2701500:273460327346032735433831Shewanella amazonensis SB2B, complete genomevacJ lipoprotein, putative9e-31133
NC_014315:2239725:225090222509022251669768Nitrosococcus watsoni C-113 chromosome, complete genomeVacJ family lipoprotein3e-30132
NC_009092:1599526:160428416042841605066783Shewanella loihica PV-4, complete genomeVacJ family lipoprotein4e-30131
NC_009665:3460906:348990934899093490694786Shewanella baltica OS185 chromosome, complete genomeVacJ family lipoprotein6e-30130
NC_011663:1709003:170900317090031709788786Shewanella baltica OS223 chromosome, complete genomeVacJ family lipoprotein2e-29129
NC_010338:1394550:141272914127291413508780Caulobacter sp. K31, complete genomeVacJ family lipoprotein8e-29127
NC_009714:265098:284347284347285039693Campylobacter hominis ATCC BAA-381, complete genomeVacJ family lipoprotein8e-29127
NC_010581:2943913:296051829605182961330813Beijerinckia indica subsp. indica ATCC 9039, complete genomeVacJ family lipoprotein2e-28125
NC_014618:1452927:146379314637931464548756Enterobacter cloacae SCF1 chromosome, complete genomeVacJ family lipoprotein1e-27123
NC_015968:3277217:328296032829603283712753Enterobacter asburiae LF7a chromosome, complete genomeVacJ family lipoprotein3e-27122
NC_015581:1891409:190496119049611905770810Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeVacJ family lipoprotein3e-27122
NC_009436:3117661:312331931233193124071753Enterobacter sp. 638, complete genomeVacJ family lipoprotein1e-27122
NC_016818:1291665:131425313142531315020768Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesurface lipoprotein4e-27121
NC_013716:2898434:290202529020252902780756Citrobacter rodentium ICC168, complete genomelipoprotein4e-27121
NC_011294:2492168:249782624978262498581756Salmonella enterica subsp. enterica serovar Enteritidis strVacJ lipoprotein1e-26120
NC_011274:2483038:248869724886972489452756Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91VacJ lipoprotein1e-26120
NC_011205:2621415:262492826249282625683756Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lipoprotein, VacJ family1e-26120
NC_011147:529458:543430543430544185756Salmonella enterica subsp. enterica serovar Paratyphi A strVacJ lipoprotein1e-26120
NC_004631:531254:545225545225545980756Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVacJ lipoprotein precursor1e-26120
NC_003198:2453074:245873224587322459487756Salmonella enterica subsp. enterica serovar Typhi str. CT18,VacJ lipoprotein precursor1e-26120
NC_006511:529424:543396543396544151756Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCVacJ lipoprotein precursor1e-26120
NC_011083:2542876:254853325485332549288756Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipoprotein, VacJ family1e-26120
NC_016831:531404:545425545425546180756Salmonella enterica subsp. enterica serovar Gallinarum/pullorumVacJ lipoprotein1e-26120
NC_016832:531208:545179545179545934756Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,phospholipid-binding lipoprotein mlaA1e-26120
NC_011742:2489000:249106224910622491817756Escherichia coli S88 chromosome, complete genomelipoprotein5e-27120
NC_008563:2565876:256793025679302568685756Escherichia coli APEC O1, complete genomeputative lipoprotein VacJ5e-27120
NC_007946:2593500:259524025952402595995756Escherichia coli UTI89, complete genomeVacJ lipoprotein precursor5e-27120
NC_012759:2342986:234807923480792348834756Escherichia coli BW2952 chromosome, complete genomeputative lipoprotein6e-27120
NC_000913:2455037:246227424622742463029756Escherichia coli K12, complete genomepredicted lipoprotein6e-27120
AC_000091:2462461:246969824696982470453756Escherichia coli W3110 DNA, complete genomepredicted lipoprotein6e-27120
NC_010473:2548946:255403925540392554794756Escherichia coli str. K-12 substr. DH10B, complete genomepredicted lipoprotein6e-27120
NC_015663:5253242:525890052589005259661762Enterobacter aerogenes KCTC 2190 chromosome, complete genomeABC transporter outer membrane lipoprotein7e-27120
NC_011748:2655989:266322526632252663980756Escherichia coli 55989, complete genomeputative lipoprotein2e-26119
NC_007613:2376974:237813823781382378893756Shigella boydii Sb227, complete genomelipoprotein precursor2e-26119
CU928145:2655989:266322526632252663980756Escherichia coli 55989 chromosome, complete genomeputative lipoprotein2e-26119
CP002185:2608000:261599926159992616754756Escherichia coli W, complete genomepredicted lipoprotein2e-26119
NC_002655:3260500:326080732608073261562756Escherichia coli O157:H7 EDL933, complete genomelipoprotein precursor2e-26119
NC_011750:2585015:258644125864412587196756Escherichia coli IAI39 chromosome, complete genomeputative lipoprotein2e-26119
NC_010658:2529033:253020625302062530961756Shigella boydii CDC 3083-94, complete genomelipoprotein, VacJ family2e-26119
NC_009800:2505872:250587225058722506627756Escherichia coli HS, complete genomelipoprotein, VacJ family2e-26119
NC_002695:3189425:319085131908513191606756Escherichia coli O157:H7 str. Sakai, complete genomelipoprotein precursor2e-26119
CP002516:1475521:148910314891031489858756Escherichia coli KO11, complete genomeVacJ family lipoprotein2e-26119
NC_011415:2732000:273937427393742740129756Escherichia coli SE11 chromosome, complete genomelipoprotein precursor2e-26119
NC_013361:3254000:326207232620723262827756Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipoprotein2e-26119
NC_013941:2928000:293191729319172932672756Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipoprotein, VacJ family2e-26119
NC_016902:1475521:148910314891031489858756Escherichia coli KO11FL chromosome, complete genomeVacJ family lipoprotein2e-26119
NC_012125:1360593:137569613756961376451756Salmonella enterica subsp. enterica serovar Paratyphi C strainVacJ lipoprotein2e-26119
NC_013421:1545386:155707315570731557834762Pectobacterium wasabiae WPP163, complete genomeVacJ family lipoprotein4e-26118
NC_012917:3198000:320157032015703202331762Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeVacJ family lipoprotein7e-26117
NC_010694:1250841:127236812723681273129762Erwinia tasmaniensis, complete genomeLipoprotein2e-25115
NC_017057:83415:104427104427105182756Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeVacJ lipoprotein3e-24112
NC_014166:2498500:254225725422572542994738Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeVacJ family lipoprotein3e-24112
NC_017056:86663:104310104310105065756Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeVacJ lipoprotein3e-24111
NC_017050:83406:104300104300105055756Rickettsia prowazekii str. Katsinyian chromosome, complete genomeVacJ lipoprotein3e-24111
NC_000963:83408:104302104302105057756Rickettsia prowazekii str. Madrid E, complete genomeVACJ LIPOPROTEIN PRECURSOR (vacJ)3e-24111
NC_015594:214500:236454236454237356903Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeVacJ family lipoprotein3e-2098.6