Pre_GI: BLASTP Hits

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Query: NC_004129:2034500:2059810 Pseudomonas fluorescens Pf-5, complete genome

Start: 2059810, End: 2060427, Length: 618

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016616:760145:762671762671763279609Dechlorosoma suillum PS chromosome, complete genomephosphoserine phosphatase/homoserine phosphotransferase3e-73274
NC_009943:305854:333067333067333672606Candidatus Desulfococcus oleovorans Hxd3, complete genomephosphoserine phosphatase/homoserine phosphotransferase bifunctional protein1e-65249
NC_013165:2700978:270711527071152707726612Slackia heliotrinireducens DSM 20476, complete genomephosphoserine phosphatase/homoserine phosphotransferase2e-49195
NC_010170:1417615:143470414347041435333630Bordetella petrii, complete genomehypothetical protein1e-29129
NC_014033:2410331:2411618241161824128501233Prevotella ruminicola 23 chromosome, complete genomephosphoserine phosphatase SerB2e-0755.8
NC_015216:2113556:2118251211825121200531803Methanobacterium sp. AL-21 chromosome, complete genomephosphoserine phosphatase SerB9e-0650.1