Pre_GI: BLASTP Hits

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Query: NC_004129:2034500:2056085 Pseudomonas fluorescens Pf-5, complete genome

Start: 2056085, End: 2056813, Length: 729

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:5121219:512276151227615123489729Pseudomonas fluorescens SBW25 chromosome, complete genomeputative racemase1e-123442
NC_020209:3262000:326516932651693265897729Pseudomonas poae RE*1-1-14, complete genomeAsp/Glu/hydantoin racemase9e-123439
NC_012731:2693091:270415127041512704894744Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehydantoin racemase2e-36152
NC_009648:1956070:197053119705311971274744Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative hydantoin racemase2e-36152
NC_003047:2798367:279902527990252799750726Sinorhizobium meliloti 1021, complete genomePUTATIVE HYDANTOIN RACEMASE PROTEIN5e-36151
NC_016845:2729654:274616627461662747038873Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative hydantoin racemase1e-35150
NC_013850:2624899:262725626272562627999744Klebsiella variicola At-22 chromosome, complete genomeAsp/Glu/hydantoin racemase8e-36150
NC_011283:2627050:262940726294072630150744Klebsiella pneumoniae 342 chromosome, complete genomehydantoin racemase8e-36150
NC_017192:1063955:106852710685271069225699Arcobacter sp. L, complete genomeputative hydantoin racemase2e-35149
NC_016514:1627664:164945216494521650195744Enterobacter cloacae EcWSU1 chromosome, complete genomehydantoin racemase6e-35147
NC_016906:4123000:413914941391494139880732Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative hydantoin racemase7e-32137
NC_014364:111000:119253119253119996744Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeHydantoin racemase1e-30133
NC_009953:3552738:355893235589323559663732Salinispora arenicola CNS-205 chromosome, complete genomeAsp/Glu racemase1e-29130
NC_012691:2146473:214951521495152150207693Tolumonas auensis DSM 9187, complete genomeAsp/Glu/hydantoin racemase3e-23108
NC_013741:1196997:120106812010681201823756Archaeoglobus profundus DSM 5631, complete genomeAsp/Glu/hydantoin racemase5e-21101
NC_013921:80856:893888938890116729Thermoanaerobacter italicus Ab9 chromosome, complete genomeAsp/Glu/hydantoin racemase1e-1996.7
NC_014964:2199252:221261022126102213338729Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeHydantoin racemase1e-1996.7
NC_014209:136152:139023139023139751729Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Hydantoin racemase4e-1995.1
NC_011144:2770842:278794827879482788694747Phenylobacterium zucineum HLK1, complete genomeAsp/Glu racemase3e-1892
NC_006510:2910000:292180029218002922549750Geobacillus kaustophilus HTA426, complete genomehydantoin racemase5e-1581.6
NC_017273:352150:358282358282359094813Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeAsp/Glu/hydantoin racemase3e-1375.5
NC_013739:2106662:213367321336732134431759Conexibacter woesei DSM 14684, complete genomeputative hydantoin racemase3e-1272.4
NC_007298:1418500:145315614531561453908753Dechloromonas aromatica RCB, complete genomehydantoin racemase5e-1271.2
NC_010623:1871492:193307019330701933849780Burkholderia phymatum STM815 chromosome 2, complete sequenceHydantoin racemase-like protein4e-1065.1
NC_007963:1582089:159836415983641599152789Chromohalobacter salexigens DSM 3043, complete genomeHydantoin racemase-like protein2e-0859.3