Pre_GI: BLASTP Hits

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Query: NC_004129:2034500:2047411 Pseudomonas fluorescens Pf-5, complete genome

Start: 2047411, End: 2049387, Length: 1977

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:977500:9874319874319893651935Shewanella sp. MR-4, complete genomehypothetical protein6e-156551
NC_012660:5242392:5251814525181452537571944Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-102372
NC_016002:1:5533553371881656Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein2e-85317
NC_010939:1920781:1932919193291919341301212Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein4e-57223
NC_016047:4108910:4123147412314741251892043Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-55218
NC_014363:232385:2455912455912471531563Olsenella uli DSM 7084 chromosome, complete genomehypothetical protein2e-0861.6