Pre_GI: BLASTP Hits

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Query: NC_004129:2034500:2042784 Pseudomonas fluorescens Pf-5, complete genome

Start: 2042784, End: 2044547, Length: 1764

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:6714545:6726472672647267282981827Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein0813
NC_009784:253852:2643662643662663421977Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein2e-81303
NC_010505:2103887:2111317211131721130171701Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein4e-20100
NC_009901:2272206:2281416228141622831731758Shewanella pealeana ATCC 700345, complete genomehypothetical protein1e-1585.5
NC_005773:5310339:5320626532062653220291404Pseudomonas syringae pv. phaseolicola 1448A, complete genomeATP/GTP-binding protein9e-1272.4
NC_014563:19307:2803928039296041566Pantoea vagans C9-1 plasmid pPag2, complete sequencehypothetical protein2e-1068.2
NC_009437:685214:7006837006837024281746Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeATP-dependent OLD family endonuclease8e-0652.8