Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:2034500:2039023 Pseudomonas fluorescens Pf-5, complete genome

Start: 2039023, End: 2039994, Length: 972

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:5121219:513711251371125138083972Pseudomonas fluorescens SBW25 chromosome, complete genomeputative metal ion transport protein6e-172603
NC_016830:4809210:482622048262204827191972Pseudomonas fluorescens F113 chromosome, complete genomemagnesium and cobalt transport protein1e-160565
NC_007005:2149275:214927521492752150246972Pseudomonas syringae pv. syringae B728a, complete genomeMg2+ transporter protein, CorA-like2e-147521
NC_012811:410776:4170854170854180951011Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative metal ion transporter1e-82306
NC_010511:2079744:2133888213388821348921005Methylobacterium sp. 4-46 chromosome, complete genomeMg2 transporter protein CorA family protein6e-79294
NC_018000:2054098:206095020609502061915966Sinorhizobium fredii USDA 257 chromosome, complete genomemetal ion transporter YfjQ1e-66253
NC_009656:115390:134256134256135224969Pseudomonas aeruginosa PA7 chromosome, complete genomemagnesium and cobalt transport protein CorA3e-62239
NC_014562:469154:483334483334484299966Pantoea vagans C9-1 chromosome, complete genomeCorA-like transporter protein2e-60232
NC_020260:882307:882307882307883275969Cronobacter sakazakii Sp291, complete genomehypothetical protein7e-59228
NC_012724:1781554:179924717992471800224978Burkholderia glumae BGR1 chromosome 1, complete genomeMagnesium and cobalt transport protein CorA4e-59228
NC_013446:2919005:293596229359622936936975Comamonas testosteroni CNB-2, complete genomemagnesium and cobalt transport protein CorA6e-56218
NC_014391:6749156:6752462675246267535681107Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeMg2 transporter protein CorA family protein2e-49196
NC_013929:7663631:7678864767886476800211158Streptomyces scabiei 87.22 chromosome, complete genomemetal-ion transporter2e-48193
NC_018750:6588206:6613297661329766144031107Streptomyces venezuelae ATCC 10712, complete genomeMagnesium and cobalt transport protein CorA1e-47190
NC_019673:895418:9145009145009155821083Saccharothrix espanaensis DSM 44229 complete genomeMagnesium and cobalt transport protein, CorA family5e-43175
NC_013169:1410384:143476114347611435753993Kytococcus sedentarius DSM 20547, complete genomeMg2+/Co2+ transporter1e-32140
NC_017317:1173619:1179831117983111809041074Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein4e-31135
NC_015683:1176449:1182661118266111837341074Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein4e-31135
NC_021064:1789980:1791566179156617925851020Propionibacterium avidum 44067, complete genomeMg2+/Co2+ transporter2e-30133
UCMB5137:409500:410243410243411202960Bacillus atrophaeus UCMB-5137putative divalent cation transport protein5e-30132
NC_013642:323799:3458903458903469451056Thermotoga naphthophila RKU-10, complete genomemagnesium and cobalt transport protein CorA1e-29130
NC_000853:569576:5916735916735927281056Thermotoga maritima MSB8, complete genomedivalent cation transport-related protein4e-29129
NC_009483:4015777:4019538401953840206051068Geobacter uraniireducens Rf4 chromosome, complete genomemagnesium and cobalt transport protein CorA1e-27124
NC_017188:753039:755486755486756445960Bacillus amyloliquefaciens TA208 chromosome, complete genomemagnesium and cobalt transport protein CorA1e-27124
NC_014551:809025:811471811471812430960Bacillus amyloliquefaciens DSM 7, complete genomemagnesium transport in/out via permease (no H+)1e-27124
NC_008344:554229:5707545707545717551002Nitrosomonas eutropha C91, complete genomemagnesium and cobalt transport protein CorA5e-27122
NC_015520:224136:237246237246238214969Mahella australiensis 50-1 BON chromosome, complete genomemagnesium and cobalt transport protein CorA2e-26120
NC_012883:636560:6430156430156441031089Thermococcus sibiricus MM 739, complete genomeMagnesium and cobalt transport protein CorA1e-26120
NC_005085:1269787:1327397132739713284341038Chromobacterium violaceum ATCC 12472, complete genomemagnesium and cobalt transport protein1e-26120
NC_017190:794820:797267797267798112846Bacillus amyloliquefaciens LL3 chromosome, complete genomemagnesium transport in/out via permease (no H+)1e-26120
NC_017191:754453:756900756900757745846Bacillus amyloliquefaciens XH7 chromosome, complete genomedivalent cation transport protein1e-26120
NC_016790:1152249:1155727115572711568271101Corynebacterium diphtheriae VA01 chromosome, complete genomemagnesium/cobalt transporter CorA6e-26118
NC_016802:1186326:1188344118834411894441101Corynebacterium diphtheriae HC02 chromosome, complete genomemagnesium/cobalt transporter CorA6e-26118
NC_016800:1219121:1219121121912112202211101Corynebacterium diphtheriae BH8 chromosome, complete genomemagnesium/cobalt transporter CorA6e-26118
NC_016785:1167057:1169075116907511701751101Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomemagnesium/cobalt transporter CorA6e-26118
NC_008255:4208913:4229484422948442305601077Cytophaga hutchinsonii ATCC 33406, complete genomemagnesium and cobalt transport protein1e-25117
NC_016789:1232993:1232993123299312340931101Corynebacterium diphtheriae PW8 chromosome, complete genomemagnesium/cobalt transporter CorA4e-25115
NC_013741:1037176:1039350103935010403811032Archaeoglobus profundus DSM 5631, complete genomemagnesium and cobalt transport protein CorA4e-24112
NC_010546:553774:5537745537745549401167Cyanothece sp. ATCC 51142 chromosome circular, complete sequencemagnesium and cobalt transport protein6e-24111
NC_013406:1145268:116547811654781166434957Paenibacillus sp. Y412MC10 chromosome, complete genomemagnesium and cobalt transport protein CorA2e-23110
NC_014221:78500:989079890799905999Truepera radiovictrix DSM 17093 chromosome, complete genomeMg2 transporter protein CorA family protein4e-22105
NC_020409:2856481:2893203289320328942671065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMagnesium and cobalt transport protein CorA1e-21103
NC_015846:1065692:1087455108745510885461092Capnocytophaga canimorsus Cc5 chromosome, complete genomemagnesium transport protein corA2e-20100
NC_006085:1859191:186966318696631870661999Propionibacterium acnes KPA171202, complete genomeputative magnesium transport protein6e-2098.6
NC_016511:1811171:182160818216081822606999Propionibacterium acnes TypeIA2 P.acn31 chromosome, completemagnesium transport protein6e-2098.6
NC_016516:1799521:181250018125001813498999Propionibacterium acnes TypeIA2 P.acn33 chromosome, completemagnesium transport protein6e-2098.6
NC_016512:1810625:182103418210341822032999Propionibacterium acnes TypeIA2 P.acn17 chromosome, completemagnesium transport protein1e-1997.4
NC_014039:1813205:182368318236831824681999Propionibacterium acnes SK137 chromosome, complete genomeputative magnesium and cobalt transport protein CorA2e-1997.1
NC_017277:3083494:3100637310063731017791143Synechocystis sp. PCC 6803, complete genomemagnesium/cobalt transport protein3e-1995.9
NC_000911:3075896:3101820310182031029621143Synechocystis sp. PCC 6803, complete genomemagnesium and cobalt transport protein3e-1995.9
NC_013132:893849:8951008951008962241125Chitinophaga pinensis DSM 2588, complete genomemagnesium and cobalt transport protein CorA2e-1790.5
NC_012914:5225609:5229032522903252300361005Paenibacillus sp. JDR-2, complete genomemagnesium and cobalt transport protein CorA5e-1685.5
NC_019892:7734519:7755759775575977568111053Singulisphaera acidiphila DSM 18658 chromosome, complete genomemagnesium Mg(2+) and cobalt Co(2+) transport protein CorA6e-1685.1
NC_014820:1618606:1637318163731816383221005Cenarchaeum symbiosum A, complete genomeMg2 and Co2 transporter1e-1584
NC_018664:2279687:2284369228436922854331065Clostridium acidurici 9a chromosome, complete genomemagnesium and cobalt transport protein CorA4e-1479
NC_013235:1354443:137183513718351372800966Nakamurella multipartita DSM 44233, complete genomeMg2 transporter protein CorA family protein9e-1477.8
NC_000909:963984:965086965086966039954Methanocaldococcus jannaschii DSM 2661, complete genomemagnesium and cobalt transport protein (corA)2e-1170.5
NC_013887:1601730:160281616028161603769954Methanocaldococcus sp. FS406-22 chromosome, complete genomemagnesium and cobalt transport protein CorA3e-1169.3
NC_013156:1182609:118260911826091183562954Methanocaldococcus fervens AG86, complete genomemagnesium and cobalt transport protein CorA4e-1169.3
NC_010516:2777205:278716327871632788098936Clostridium botulinum B1 str. Okra, complete genomeputative magnesium and cobalt transport protein CorA9e-1168.2
NC_014122:143446:143446143446144390945Methanocaldococcus infernus ME chromosome, complete genomemagnesium and cobalt transport protein CorA2e-1067
NC_010520:2807429:281765128176512818586936Clostridium botulinum A3 str. Loch Maree, complete genomeputative magnesium and cobalt transport protein CorA2e-1067
NC_012808:3972983:3987232398723239882361005Methylobacterium extorquens AM1, complete genomeputative magnesium/cobalt transport protein3e-1066.2
NC_012913:2189862:221383722138372214784948Aggregatibacter aphrophilus NJ8700, complete genomemagnesium and cobalt transport protein CorA6e-1065.1
NC_016027:2047954:2052591205259120536011011Gluconacetobacter xylinus NBRC 3288, complete genomemagnesium/cobalt transporter2e-0963.9
NC_017297:2796000:280308828030882804023936Clostridium botulinum F str. 230613 chromosome, complete genomeputative magnesium and cobalt transport protein CorA4e-0962.4
NC_017187:1564403:156499815649981565951954Arcobacter butzleri ED-1, complete genomemagnesium and cobalt transport protein7e-0961.6
NC_014935:1223817:123735212373521238287936Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemg2 transporter protein cora family protein8e-0858.2
NC_011294:1465500:146554114655411466524984Salmonella enterica subsp. enterica serovar Enteritidis strzinc transporter3e-0756.2
NC_014910:4316706:434028543402854341271987Alicycliphilus denitrificans BC chromosome, complete genomemagnesium and cobalt transport protein cora4e-0755.8
NC_018419:226000:230488230488231438951Secondary endosymbiont of Ctenarytaina eucalypti chromosome,magnesium Mg(2+) and cobalt Co(2+) transport protein CorA4e-0755.8
NC_015425:906969:928335928335929276942Clostridium botulinum BKT015925 chromosome, complete genomeputative divalent cation transporter1e-0653.9