Pre_GI: BLASTP Hits

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Query: NC_004129:195347:210070 Pseudomonas fluorescens Pf-5, complete genome

Start: 210070, End: 210630, Length: 561

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:4043198:406973640697364070212477Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-2096.3
NC_016514:1627664:162903016290301629587558Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcL2e-1892
NC_012559:2353236:237554523755452376099555Laribacter hongkongensis HLHK9, complete genomeputative phospholipid-binding protein7e-1890.1
NC_008686:1383891:141573814157381416283546Paracoccus denitrificans PD1222 chromosome 1, complete sequencePEBP family protein4e-1787.4
NC_010162:7620000:763660376366037637082480Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-1685.9
NC_019892:5171629:518949251894925189965474Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family2e-1685.5
NC_012779:2424967:244479824447982445349552Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-1684.3
NC_013508:2356865:238442323844232384974552Edwardsiella tarda EIB202, complete genomeDLP12 prophage; predicted kinase inhibitor9e-1683.2
NC_009664:570768:587546587546588061516Kineococcus radiotolerans SRS30216, complete genomePEBP family protein1e-1582.8
NC_018750:1591895:160247616024761603015540Streptomyces venezuelae ATCC 10712, complete genomePhospholipid-binding protein2e-1582
NC_011083:1173802:117689711768971177445549Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1581.6
NC_011294:1048223:105002410500241050572549Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-1581.6
NC_012125:2687980:270254627025462703094549Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein3e-1581.6
NC_011274:1057887:105931310593131059861549Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1581.6
NC_007912:1924392:194016219401621940734573Saccharophagus degradans 2-40, complete genomephospholipid-binding protein2e-1581.6
NC_011149:1035990:104172810417281042276549Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-1581.3
NC_011094:1127983:113107811310781131626549Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-1581.3
NC_007963:2644930:265125926512592651735477Chromohalobacter salexigens DSM 3043, complete genomeYbhB and YbcL5e-1580.9
AC_000091:558920:570116570116570667552Escherichia coli W3110 DNA, complete genomepredicted kinase inhibitor4e-1580.9
NC_010473:498252:509448509448509999552Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted kinase inhibitor4e-1580.9
NC_000913:558920:570116570116570667552Escherichia coli K12, complete genomeDLP12 prophage; predicted kinase inhibitor4e-1580.9
NC_012759:461680:472876472876473427552Escherichia coli BW2952 chromosome, complete genomeputative kinase inhibitor4e-1580.9
NC_012947:3231893:324234532423453242896552Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completekinase inhibitor4e-1580.9
NC_012967:531000:542783542783543334552Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor4e-1580.9
NC_009077:3323291:332775733277573328293537Mycobacterium sp. JLS, complete genomePEBP family protein4e-1580.9
NC_008705:3377697:338216333821633382699537Mycobacterium sp. KMS, complete genomePEBP family protein4e-1580.9
NC_008146:3349415:335388133538813354417537Mycobacterium sp. MCS, complete genomeYbhB and YbcL4e-1580.9
NC_013592:1056500:106081310608131061394582Dickeya dadantii Ech586, complete genomePEBP family protein6e-1580.5
NC_013008:2910567:292261229226122923163552Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor7e-1580.1
NC_013941:699286:710239710239710790552Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphatidylethanolamine-binding protein7e-1580.1
NC_010102:2020762:203531720353172035865549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-1580.1
NC_011205:1147556:115065111506511151199549Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein7e-1580.1
NC_009901:1516340:151984615198461520373528Shewanella pealeana ATCC 700345, complete genomePEBP family protein9e-1579.7
NC_003197:1170746:117217211721721172720549Salmonella typhimurium LT2, complete genomeputative outer membrane protein1e-1479.3
NC_016810:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1479.3
NC_016856:1128715:113051611305161131064549Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein1e-1479.3
NC_016857:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein1e-1479.3
NC_016860:1168431:116985711698571170405549Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein1e-1479.3
NC_016863:1128381:112980711298071130355549Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein1e-1479.3
NC_014118:1559770:157122815712281571800573Burkholderia sp. CCGE1002 chromosome chromosome 2, completePEBP family protein2e-1479
NC_017046:1127325:112878411287841129299516Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1478.6
NC_015574:1845000:185881718588171859275459Methanobacterium sp. SWAN-1 chromosome, complete genomeYbhB YbcL family protein2e-1478.6
NC_016831:1950650:196521419652141965762549Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1478.6
NC_007517:1107408:112365711236571124187531Geobacter metallireducens GS-15, complete genomeYbhB and YbcL3e-1478.2
NC_010334:1561691:156511715651171565644528Shewanella halifaxensis HAW-EB4, complete genomePEBP family protein7e-1477
NC_013959:2801557:282341728234172823893477Sideroxydans lithotrophicus ES-1 chromosome, complete genomePEBP family protein7e-1477
NC_011884:2584791:260420626042062604679474Cyanothece sp. PCC 7425, complete genomePEBP family protein2e-1375.5
NC_008391:699222:710842710842711414573Burkholderia cepacia AMMD chromosome 2, complete sequenceYbhB and YbcL2e-1375.1
NC_007355:3580100:359783135978313598415585Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein2e-1375.1
NC_000916:191561:209246209246209701456Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein1e-1272.8
NC_011961:891815:892614892614893204591Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehypothetical protein2e-1272
NC_016799:1268706:130150013015001302057558Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein5e-1270.9
NC_016785:1193471:122626812262681226825558Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein5e-1270.9
NC_016800:1243000:127461612746161275173558Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein5e-1270.9
NC_016801:1255611:129127912912791291836558Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein4e-1270.9
NC_016782:1227246:124621612462161246773558Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein6e-1270.5
NC_016787:1207488:123564112356411236198558Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein6e-1270.5
NC_016788:1214026:124562812456281246185558Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein6e-1270.5
NC_016790:1177349:121301812130181213575558Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein6e-1270.5
NC_020389:2439067:243906724390672439660594Methanosarcina mazei Tuc01, complete genomePhospholipid-binding protein6e-1270.5
NC_002935:1237585:127245212724521272991540Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein8e-1270.1
NC_000117:845141:849067849067849519453Chlamydia trachomatis D/UW-3/CX, complete genomehypothetical protein1e-1169.3
NC_007645:2922190:292293329229332923412480Hahella chejuensis KCTC 2396, complete genomePhospholipid-binding protein3e-1168.2
NC_012967:786534:800059800059800535477Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor protein4e-1167.8
AP010958:867869:881393881393881869477Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted kinase inhibitor4e-1167.8
NC_013353:867869:881393881393881869477Escherichia coli O103:H2 str. 12009, complete genomekinase inhibitor4e-1167.8
NC_015859:1631573:165334016533401653900561Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein4e-1167.8
NC_002655:919654:931451931451931927477Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-1167.4
NC_002695:917509:929799929799930275477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-1167.4
NC_011353:921500:933164933164933640477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomekinase inhibitor protein5e-1167.4
NC_013008:918215:934757934757935233477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor protein5e-1167.4
NC_013941:1014386:102682910268291027305477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-1167.4
NC_011601:756885:771868771868772344477Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomekinase inhibitor protein6e-1167
NC_015434:6508500:651538865153886515921534Verrucosispora maris AB-18-032 chromosome, complete genomePEBP family protein1e-1066.2
NC_014830:532122:533799533799534236438Intrasporangium calvum DSM 43043 chromosome, complete genomePEBP family protein2e-1065.5
NC_008639:2786447:280605428060542806539486Chlorobium phaeobacteroides DSM 266, complete genomePEBP family protein4e-1064.3
NC_010622:2385932:240427624042762404785510Burkholderia phymatum STM815 chromosome 1, complete sequencePEBP family protein5e-1063.9
NC_007347:1239982:126166212616621262228567Ralstonia eutropha JMP134 chromosome 1, complete sequenceYbhB and YbcL1e-0963.2
NC_015381:3457784:350546335054633505966504Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-0962.8
NC_013741:27353:452354523545756522Archaeoglobus profundus DSM 5631, complete genomePEBP family protein4e-0960.8
NC_014215:492855:512935512935513399465Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Phosphatidylethanolamine-binding protein5e-0857.4
NC_014828:1019533:1062958106295810645891632Ethanoligenens harbinense YUAN-3 chromosome, complete genomePEBP family protein5e-0857.4
NC_003198:1078113:108120810812081081755548Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-0857
NC_016645:245000:246722246722247273552Pyrobaculum sp. 1860 chromosome, complete genomehypothetical protein7e-0857
NC_021184:4524500:4537481453748145389081428Desulfotomaculum gibsoniae DSM 7213, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family3e-0755.1
NC_002944:1781905:179280517928051793425621Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein6e-0753.9
NC_019964:930966:935656935656936153498Halovivax ruber XH-70, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family3e-0651.6
NC_015957:8845274:8866898886689888698762979Streptomyces violaceusniger Tu 4113 chromosome, complete genomecarbohydrate binding family 66e-0650.8