Pre_GI: BLASTP Hits

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Query: NC_004129:195347:209598 Pseudomonas fluorescens Pf-5, complete genome

Start: 209598, End: 209846, Length: 249

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:155009115500911550345255Pseudomonas putida F1, complete genomehypothetical protein1e-29128
NC_014355:2321957:232395423239542324220267Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-2097.8
NC_009483:4015777:402305940230594023349291Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein1e-1685.5
NC_009523:5475812:548743854874385487704267Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein4e-1580.1
NC_011884:315839:323682323682324014333Cyanothece sp. PCC 7425, complete genomehypothetical protein3e-1373.9
NC_011979:3070110:308510330851033085372270Geobacter sp. FRC-32, complete genomehypothetical protein1e-1168.6
NC_010170:4800000:480673048067304807038309Bordetella petrii, complete genomehypothetical protein2e-1167.8
NC_008751:1762562:178385417838541784171318Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein2e-1167.8
NC_012751:1988280:199521819952181995532315Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein2e-1064.3
NC_012751:1988280:199127819912781991592315Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein2e-1064.3
NC_015578:3495034:350839635083963508671276Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein4e-1063.5
NC_011274:4577402:459139145913914591693303Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-0961.6
NC_011294:4604283:461814046181404618442303Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-0961.6
NC_016831:4556761:457075045707504571052303Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-0961.6
NC_011205:4761598:477544747754474775749303Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-0961.6
NC_009074:3791232:379772937977293798001273Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein3e-0960.8
NC_005125:1161000:118958311895831189852270Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0754.7
NC_007434:111607:118253118253118501249Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein2e-0754.3
NC_009076:3876733:388221338822133882461249Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-0754.3
NC_008609:1976403:198500919850091985281273Pelobacter propionicus DSM 2379, complete genomepANL125e-0753.1
NC_021150:3282702:329611532961153296420306Azotobacter vinelandii CA6, complete genomehypothetical protein1e-0652.4
NC_012560:3282704:329611732961173296422306Azotobacter vinelandii DJ, complete genomehypothetical protein1e-0652.4
NC_010296:5484624:549256054925605492817258Microcystis aeruginosa NIES-843, complete genomeCopG/DNA-binding domain-containing protein2e-0651.6
NC_011761:2344408:236117423611742361476303Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein4e-0650.1
NC_011206:2239109:225587522558752256177303Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein4e-0650.1