Pre_GI: BLASTP Hits

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Query: NC_004129:195347:208815 Pseudomonas fluorescens Pf-5, complete genome

Start: 208815, End: 209081, Length: 267

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:1741816:175287417528741753146273Pseudomonas fluorescens Pf-5, complete genomehypothetical protein1e-30131
NC_016830:4639388:464985646498564650131276Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-1993.2
NC_020209:4943734:496239349623934962686294Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-1892
NC_015379:4249238:425752842575284257806279Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein1e-1891.7
NC_020209:4943734:497138149713814971674294Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-1891.7
NC_015379:908904:927376927376927648273Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-1788.6
NC_016830:2247789:226180822618082262080273Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-1684.7
NC_015379:4630367:464968646496864649958273Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-1684.7
NC_016830:952342:972641972641972901261Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein6e-1579.3
NC_016830:1719407:173445817344581734718261Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein7e-1579.3
NC_016830:530397:543300543300543497198Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein7e-1269.3