Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1872374 Pseudomonas fluorescens Pf-5, complete genome

Start: 1872374, End: 1873162, Length: 789

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:1735595:175444317544431755231789Pseudomonas fluorescens PfO-1, complete genomeChemotaxis phosphatase, CheZ2e-137488
NC_017986:4374979:439618243961824396970789Pseudomonas putida ND6 chromosome, complete genomechemotaxis phosphatase CheZ3e-123441
NC_009512:1691930:171313317131331713921789Pseudomonas putida F1, complete genomechemotaxis phosphatase, CheZ3e-123441
NC_009654:3849774:386936638693663870154789Marinomonas sp. MWYL1, complete genomechemotaxis phosphatase, CheZ3e-57221
NC_012559:2309566:232417523241752325119945Laribacter hongkongensis HLHK9, complete genomeCheZ5e-32137
NC_007298:778723:807693807693808556864Dechloromonas aromatica RCB, complete genomeChemotaxis phosphatase, CheZ1e-28126
NC_015731:1731896:174401817440181744776759Nitrosomonas sp. Is79A3 chromosome, complete genomechemotaxis phosphatase, CheZ4e-26118
NC_012968:1352463:135429313542931354985693Methylotenera mobilis JLW8, complete genomechemotaxis phosphatase, CheZ2e-25116
NC_013592:1668092:170619117061911706835645Dickeya dadantii Ech586, complete genomechemotaxis phosphatase, CheZ2e-25116
NC_014562:1772842:179789317978931798534642Pantoea vagans C9-1 chromosome, complete genomeChemotaxis protein cheZ3e-25115
NC_014500:3071764:307897730789773079621645Dickeya dadantii 3937 chromosome, complete genomechemotaxis response - phosphatase cheZ1e-24113
NC_016818:1963875:198579419857941986438645Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completechemotaxis protein1e-22107
NC_012880:1765920:180223818022381802882645Dickeya dadantii Ech703, complete genomechemotaxis phosphatase, CheZ3e-22105
NC_015563:606783:610276610276610890615Delftia sp. Cs1-4 chromosome, complete genomechemotaxis phosphatase, CheZ8e-22104
NC_010002:661696:665189665189665803615Delftia acidovorans SPH-1, complete genomechemotaxis phosphatase, CheZ9e-22103
NC_012968:865465:881281881281881946666Methylotenera mobilis JLW8, complete genomechemotaxis phosphatase, CheZ2e-1892.8
NC_015422:4395388:440965844096584410290633Alicycliphilus denitrificans K601 chromosome, complete genomechemotaxis phosphatase, CheZ4e-1892
NC_014910:4026613:404138940413894042021633Alicycliphilus denitrificans BC chromosome, complete genomechemotaxis phosphatase chez4e-1892
NC_015138:4905935:492439449243944925041648Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completechemotaxis phosphatase, CheZ4e-1892
NC_003919:2233000:225712522571252257751627Xanthomonas axonopodis pv. citri str. 306, complete genomechemotaxis related protein1e-1480.5
NC_007508:2234080:225037922503792251005627Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomechemotaxis phosphatase CheZ1e-1480.5
NC_017267:2326443:234545823454582346084627Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completechemotaxis phosphatase CheZ3e-1479
NC_010688:2532929:255329225532922553918627Xanthomonas campestris pv. campestris, complete genomeChemotaxis phosphatase CheZ3e-1479
NC_003902:2211790:222893522289352229561627Xanthomonas campestris pv. campestris str. ATCC 33913, completechemotaxis related protein5e-1478.2
NC_014258:42262:457704577046384615Pantoea vagans C9-1 plasmid pPag3, complete sequencemethionyl-tRNA synthetase4e-1272