Pre_GI: BLASTP Hits

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Query: NC_004088:4202247:4219994 Yersinia pestis KIM, complete genome

Start: 4219994, End: 4220938, Length: 945

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:318860:318860318860319804945Yersinia pestis Nepal516, complete genomeribonuclease BN2e-180631
NC_017265:4065625:408337240833724084256885Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Ribonuclease BN3e-168590
NC_008800:36500:413284132842218891Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,ribonuclease BN1e-151535
NC_011080:4177443:419767041976704198542873Salmonella enterica subsp. enterica serovar Newport str. SL254,tRNA-processing ribonuclease BN1e-115416
NC_010067:3538169:356543335654333566305873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-115415
NC_013282:4312791:433154943315494332418870Cronobacter turicensis, complete genometRNA-processing ribonuclease BN9e-107386
NC_015497:375909:375909375909376811903Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeribonuclease BN7e-71267
NC_016809:389561:407099407099407908810Haemophilus influenzae 10810, complete genomeinner membrane protein2e-61236
NC_009494:775676:7794957794957807331239Legionella pneumophila str. Corby chromosome, complete genomeribonuclease BN1e-54213
NC_006368:750356:7520807520807533181239Legionella pneumophila str. Paris, complete genomehypothetical protein1e-54213
NC_006369:734080:7373297373297385671239Legionella pneumophila str. Lens, complete genomehypothetical protein3e-54212
NC_002942:675829:6822156822156834531239Legionella pneumophila subsp. pneumophila str. Philadelphia 1,ribonuclease BN4e-54211
NC_002516:1031386:1037650103765010388851236Pseudomonas aeruginosa PAO1, complete genomeprobable ribonuclease4e-50198
NC_014722:1084616:1112892111289211143011410Burkholderia rhizoxinica HKI 454, complete genomeribonuclease BN2e-49196
NC_014125:766576:7703947703947714881095Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeribonuclease BN2e-47189
NC_003295:1654000:1674515167451516758401326Ralstonia solanacearum GMI1000, complete genomePUTATIVE RIBONUCLEASE BN TRANSMEMBRANE PROTEIN9e-47187
NC_015856:3436951:3448755344875534500591305Collimonas fungivorans Ter331 chromosome, complete genomeribonuclease BN3e-46186
NC_014311:1635408:1662194166219416635161323Ralstonia solanacearum PSI07 chromosome, complete genometRNA-processing ribonuclease BN9e-46184
NC_002971:1523065:152649715264971527333837Coxiella burnetii RSA 493, complete genomeribonuclease BN, putative2e-38159
NC_017501:1829500:1831771183177118329971227Neisseria meningitidis 8013, complete genometRNA-processing ribonuclease BN3e-32139
NC_017517:527687:5699835699835712031221Neisseria meningitidis M01-240355 chromosome, complete genomeYihY family protein1e-31137
NC_013016:419604:4392384392384404941257Neisseria meningitidis alpha14 chromosome, complete genomebifunctional ribonuclease BN/hypothetical protein1e-31137
NC_017514:1721416:1723592172359217248181227Neisseria meningitidis M01-240149 chromosome, complete genomeYihY family protein1e-31137
NC_017515:1744500:1748241174824117494671227Neisseria meningitidis M04-240196 chromosome, complete genomeYihY family protein1e-31137
NC_017516:1755500:1759283175928317605091227Neisseria meningitidis H44/76 chromosome, complete genomeYihY family protein1e-31137
NC_009483:739010:7598017598017611501350Geobacter uraniireducens Rf4 chromosome, complete genomeputative ribonuclease BN2e-24113
NC_002939:2697767:2697767269776726989601194Geobacter sulfurreducens PCA, complete genomeribonuclease BN, putative2e-24113
NC_020409:192508:2120862120862134741389Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeRibonuclease BN2e-2099.8
NC_007484:1823751:1827782182778218291251344Nitrosococcus oceani ATCC 19707, complete genomeRibonuclease BN3e-2099.4
NC_003228:3212500:3223481322348132248001320Bacteroides fragilis NCTC 9343, complete genomeputative tRNA processing ribonuclease3e-1892.8
NC_016776:3258939:3260890326089032622091320Bacteroides fragilis 638R, complete genomeputative tRNA processing ribonuclease3e-1892.8
NC_020126:8080574:8083882808388280852311350Myxococcus stipitatus DSM 14675, complete genomeYihY family protein2e-1480.1
NC_013517:773280:7999077999078011811275Sebaldella termitidis ATCC 33386, complete genomeribonuclease BN4e-1272.4
NC_011768:5631288:5638747563874756400991353Desulfatibacillum alkenivorans AK-01, complete genomeribonuclease BN1e-1067.4
NC_015416:2723189:2725808272580827268511044Methanosaeta concilii GP-6 chromosome, complete genomeYihY family protein2e-1067
NC_015144:1576047:158298715829871583892906Weeksella virosa DSM 16922 chromosome, complete genomeribonuclease BN2e-1066.6
NC_014315:1668366:1683530168353016848731344Nitrosococcus watsoni C-113 chromosome, complete genomeribonuclease BN4e-1065.9
NC_003228:3545811:354581135458113546746936Bacteroides fragilis NCTC 9343, complete genomeputative ribonuclease7e-1065.1
NC_006347:3638165:363816536381653639100936Bacteroides fragilis YCH46, complete genomeputative serum resistance protein BrkB7e-1064.7
NC_014958:3094500:3112349311234931135541206Deinococcus maricopensis DSM 21211 chromosome, complete genomeribonuclease BN2e-0963.5
NC_004193:205278:206591206591207439849Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-0963.2
NC_016776:3587983:359121635912163592151936Bacteroides fragilis 638R, complete genomeputative ribonuclease3e-0962.8
NC_015954:1300868:130228213022821303055774Halophilic archaeon DL31 chromosome, complete genomeribonuclease BN2e-0859.7
NC_010001:3266561:326846932684693269269801Clostridium phytofermentans ISDg, complete genomeribonuclease BN7e-0858.2
NC_020054:1666263:1668967166896716700101044Fibrella aestuarina BUZ 2 drat genomehypothetical protein2e-0653.9
NC_010172:1199725:1216229121622912172721044Methylobacterium extorquens PA1, complete genomeribonuclease BN3e-0652.8
NC_014972:3227500:3240817324081732422381422Desulfobulbus propionicus DSM 2032 chromosome, complete genomeribonuclease BN4e-0652.4
NC_010725:2589014:2605948260594826071381191Methylobacterium populi BJ001, complete genomeribonuclease BN5e-0652