Pre_GI: BLASTP Hits

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Query: NC_004088:3955933:3955933 Yersinia pestis KIM, complete genome

Start: 3955933, End: 3956469, Length: 537

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:438785:438785438785439780996Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-95348
NC_017160:643406:661917661917662912996Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-95348
NC_009381:427515:446026446026447021996Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-95348
NC_005810:3238391:325690232569023257897996Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-95348
NC_003143:645559:664070664070665065996Yersinia pestis CO92, complete genomehypothetical protein1e-95348
NC_010159:1101241:110124111012411102149909Yersinia pestis Angola, complete genome3e-73274
NC_014029:699078:717589717589718002414Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-68256
NC_014029:699078:717971717971718585615Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-2097.4