Pre_GI: BLASTP Hits

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Query: NC_004088:3859173:3868029 Yersinia pestis KIM, complete genome

Start: 3868029, End: 3868478, Length: 450

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3905369:3917401391740139187201320Yersinia pseudotuberculosis PB1/+, complete genometype II and III secretion system protein5e-82302
NC_006155:3992818:4005940400594040072591320Yersinia pseudotuberculosis IP 32953, complete genomeputative outer membrane secretin family protein5e-82302
NC_009708:692508:7054477054477067661320Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II/III secretion system protein6e-82301
NC_010465:733916:7458167458167470871272Yersinia pseudotuberculosis YPIII, complete genometype II and III secretion system protein3e-81300
NC_010159:259695:268551268551269000450Yersinia pestis Angola, complete genome7e-81298
NC_009381:522731:535615535615536064450Yersinia pestis Pestoides F chromosome, complete genomeouter membrane secretin family protein7e-81298
NC_008149:650706:663591663591664040450Yersinia pestis Nepal516, complete genomeouter membrane secretin family protein6e-81298
NC_014029:792719:805598805598806047450Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-81298
NC_017154:734875:747761747761748210450Yersinia pestis D106004 chromosome, complete genomehypothetical protein6e-81298
NC_017160:737000:749939749939750388450Yersinia pestis D182038 chromosome, complete genomehypothetical protein6e-81298
NC_017168:341233:350799350799351248450Yersinia pestis A1122 chromosome, complete genometype II and III secretion system protein6e-81298
NC_017265:3724500:373338937333893733838450Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly6e-81298
NC_008150:3430000:343891134389113439360450Yersinia pestis Antiqua, complete genomeputative outer membrane secretin family protein2e-80297
NC_015224:3820338:3841986384198638432181233Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein1e-63241
NC_008800:3955284:3963583396358339649441362Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein1e-63241
NC_002940:1065246:1068170106817010695401371Haemophilus ducreyi 35000HP, complete genomerough colony protein A2e-33141
NC_012913:167034:1797691797691811511383Aggregatibacter aphrophilus NJ8700, complete genomeRcpA2e-33140
NC_013416:668152:6841566841566854181263Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRcpA6e-33139
NC_016513:974402:9904159904159917971383Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completerough colony protein A6e-33139
NC_004605:741000:7519177519177532601344Vibrio parahaemolyticus RIMD 2210633 chromosome II, completerough colony protein RcpA3e-32137
NC_004460:81687:9219392193935031311Vibrio vulnificus CMCP6 chromosome II, complete sequenceFlp pilus assembly protein2e-31134
NC_005140:660305:6707986707986721231326Vibrio vulnificus YJ016 chromosome II, complete sequencerough colony protein RcpA2e-31134
NC_014966:638355:6487766487766501011326Vibrio vulnificus MO6-24/O chromosome II, complete sequencetype II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly3e-31134
NC_013716:4306695:4368296436829643697441449Citrobacter rodentium ICC168, complete genomeputative tight adherence secretin RcpA3e-31133
NC_009511:5362705:5363477536347753650571581Sphingomonas wittichii RW1 chromosome, complete genometype II and III secretion system protein9e-22102
NC_012791:4680500:4685562468556246869351374Variovorax paradoxus S110 chromosome 1, complete genometype II and III secretion system protein1e-2099
NC_014931:5594946:5599821559982156012091389Variovorax paradoxus EPS chromosome, complete genometype II and III secretion system protein1e-1995.5
NC_013223:1349000:1371223137122313725901368Desulfohalobium retbaense DSM 5692, complete genometype II and III secretion system protein7e-1992.8
NC_007794:1553000:1560594156059415621471554Novosphingobium aromaticivorans DSM 12444, complete genometype II and III secretion system protein5e-1889.7
NC_010501:908000:9380999380999393581260Pseudomonas putida W619, complete genometype II and III secretion system protein5e-1889.7
NC_009831:2884851:2884851288485128863021452Shewanella sediminis HAW-EB3, complete genomeflp pilus assembly protein, secretin CpaC5e-1889.7
NC_004547:843475:8629858629858644211437Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-1685.1
NC_015594:332432:3414953414953427331239Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completetype II and III secretion system protein8e-1682.8
NC_007614:2675302:2686314268631426880381725Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II and III secretion system protein9e-1682.4
NC_016002:2453919:2488858248885824904201563Pseudogulbenkiania sp. NH8B, complete genometype II and III secretion system protein4e-1580.5
NC_008260:228475:2363302363302375501221Alcanivorax borkumensis SK2, complete genometype II secretion system protein, probable5e-1580.1
NC_009901:2427291:2439095243909524405311437Shewanella pealeana ATCC 700345, complete genometype II and III secretion system protein6e-1579.7
NC_010334:2749250:2763724276372427651601437Shewanella halifaxensis HAW-EB4, complete genometype II and III secretion system protein7e-1579.3
NC_017249:8221992:8262784826278482642381455Bradyrhizobium japonicum USDA 6, complete genomeRhcC2 protein1e-1478.6
NC_004463:1992000:1995366199536619966581293Bradyrhizobium japonicum USDA 110, complete genomeRhcC2 protein1e-1478.6
NC_008609:2933468:2944165294416529453251161Pelobacter propionicus DSM 2379, complete genometype II and III secretion system protein2e-1478.2
NC_002678:5139557:5149189514918951504871299Mesorhizobium loti MAFF303099, complete genometype II secretion system protein2e-1477.8
NC_011894:2618951:2653372265337226548111440Methylobacterium nodulans ORS 2060, complete genometype II and III secretion system protein4e-1477
NC_008786:266959:2669592669592691032145Verminephrobacter eiseniae EF01-2, complete genometype II and III secretion system protein4e-1477
NC_004463:3857763:3871115387111538727671653Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein5e-1476.6
NC_018691:198909:2068202068202080311212Alcanivorax dieselolei B5 chromosome, complete genomeType II secretion system protein, probable1e-1375.5
NC_009485:1604942:1606415160641516079051491Bradyrhizobium sp. BTAi1 chromosome, complete genomepilus assembly protein CpaC1e-1375.1
NC_014733:1073540:1073540107354010755552016Methylovorus sp. MP688 chromosome, complete genometype II and iii secretion system protein2e-1271.2
NC_016613:2759908:2780675278067527821411467Vibrio sp. EJY3 chromosome 1, complete sequencepilus assembly protein CpaC4e-1270.5
NC_015677:1282865:1298431129843113004372007Ramlibacter tataouinensis TTB310 chromosome, complete genomesecretin, general secretion pathway protein D4e-1270.1
NC_002939:1926084:1940793194079319432612469Geobacter sulfurreducens PCA, complete genometype II secretion system protein, putative1e-1168.9
NC_011661:1049767:1051499105149910557644266Dictyoglomus turgidum DSM 6724, complete genometype II and III secretion system protein2e-1167.8
NC_014207:500373:5108415108415133572517Methylotenera sp. 301 chromosome, complete genometype II and III secretion system protein4e-1167
NC_014654:1581689:1600891160089116027801890Halanaerobium sp. 'sapolanicus' chromosome, complete genometype II and III secretion system protein3e-1167
NC_009434:608765:6201936201936223312139Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilQ1e-1065.5
NC_007484:266594:2760422760422781412100Nitrosococcus oceani ATCC 19707, complete genomeFimbrial assembly protein pilQ precursor2e-1064.7
NC_014311:1309562:1309562130956213118412280Ralstonia solanacearum PSI07 chromosome, complete genometype II secretory pathway, gspd-related protein2e-1064.7
NC_012785:1988527:1991297199129719991837887Kosmotoga olearia TBF 19.5.1, complete genometype II and III secretion system protein2e-1064.3
NC_003296:556836:5876855876855897812097Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE GENERAL SECRETION PATHWAY GSPD-RELATED PROTEIN2e-1064.3
NC_013722:2784000:2805567280556728074861920Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein pilq3e-1064.3
NC_015061:366552:3739673739673759461980Rahnella sp. Y9602 chromosome, complete genomegeneral secretion pathway protein D1e-0962
NC_017047:370837:3766213766213786001980Rahnella aquatilis HX2 chromosome, complete genomegeneral secretory pathway component, cryptic1e-0962
NC_007645:6096345:6104404610440461065662163Hahella chejuensis KCTC 2396, complete genometype 4 fimbrial biogenesis protein PilQ1e-0962
NC_016818:362548:3817163817163837011986Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completegeneral secretion pathway protein D1e-0962
NC_007517:2055305:2071154207115420737392586Geobacter metallireducens GS-15, complete genometype II and III secretion system protein2e-0961.2
NC_014315:352395:3643903643903664892100Nitrosococcus watsoni C-113 chromosome, complete genometype IV pilus secretin PilQ3e-0960.8
NC_011899:1969187:1990847199084719926551809Halothermothrix orenii H 168, complete genometype II and III secretion system protein4e-0960.5
NC_009439:574437:5837745837745858942121Pseudomonas mendocina ymp, complete genometype IV pilus secretin PilQ4e-0960.1
NC_011751:3530954:3559790355979035618502061Escherichia coli UMN026 chromosome, complete genomegeneral secretion pathway protein D9e-0959.3
NC_008253:3161311:3204785320478532068452061Escherichia coli 536, complete genomehypothetical type II secretion protein GspD9e-0959.3
NC_012967:3012317:3036934303693430389942061Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein GspD9e-0959.3
NC_010498:3291344:3318117331811733201772061Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspD9e-0959.3
NC_011745:3511600:3534163353416335362232061Escherichia coli ED1a chromosome, complete genomegeneral secretion pathway protein D8e-0959.3
NC_011750:3584000:3607684360768436097442061Escherichia coli IAI39 chromosome, complete genomegeneral secretion pathway protein D8e-0959.3
NC_015410:617020:6261286261286282422115Pseudomonas mendocina NK-01 chromosome, complete genometype 4 fimbrial biogenesis outer membrane protein PilQ7e-0959.3
NC_010814:1739706:1750327175032717530022676Geobacter lovleyi SZ, complete genometype IV pilus secretin PilQ9e-0958.9
NC_015581:1133775:1154293115429311563772085Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomegeneral secretion pathway protein D1e-0858.5
NC_015185:1414453:1441743144174314432631521Desulfurobacterium thermolithotrophum DSM 11699 chromosome,type II and III secretion system protein1e-0858.5
NC_011742:3277941:3301353330135333034132061Escherichia coli S88 chromosome, complete genomegeneral secretion pathway protein D2e-0857.8
NC_007946:3289151:3313654331365433157142061Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspD2e-0857.8
NC_008563:3362058:3386561338656133886212061Escherichia coli APEC O1, complete genomeputative type II secretion protein GspD2e-0857.8
NC_011979:2892119:2912772291277229151892418Geobacter sp. FRC-32, complete genometype II and III secretion system protein3e-0857.8
NC_007775:1002934:1009528100952810116992172Synechococcus sp. JA-3-3Ab, complete genomeputative type IV pilus secretin PilQ3e-0857.4
NC_015740:636667:6470286470286491482121Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 fimbrial biogenesis protein PilQ4e-0857
NC_009348:1475955:1494612149461214967712160Aeromonas salmonicida subsp. salmonicida A449, complete genomeS-protein secretion component D4e-0857
NC_011979:3341099:3350666335066633534012736Geobacter sp. FRC-32, complete genometype IV pilus secretin PilQ4e-0857
NC_016616:1233555:1243206124320612453802175Dechlorosoma suillum PS chromosome, complete genometype IV pilus secretin PilQ/competence protein5e-0856.6
NC_020064:3998715:4059138405913840610451908Serratia marcescens FGI94, complete genomegeneral secretion pathway protein D6e-0856.2
NC_014762:1204584:1231801123180112334081608Sulfuricurvum kujiense DSM 16994 chromosome, complete genometype ii and iii secretion system protein6e-0856.2
NC_009483:2201986:2233390223339022357802391Geobacter uraniireducens Rf4 chromosome, complete genometype II and III secretion system protein8e-0856.2
NC_012912:3749156:3768180376818037702702091Dickeya zeae Ech1591, complete genomegeneral secretion pathway protein D1e-0755.5
NC_005126:4423964:4444107444410744459511845Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctC2e-0755.1
NC_015731:2950874:2950874295087429529702097Nitrosomonas sp. Is79A3 chromosome, complete genometype IV pilus secretin PilQ2e-0755.1
NC_006512:952894:9589629589629601761215Idiomarina loihiensis L2TR, complete genomepossible Flp pilus assembly protein CpaC2e-0754.7
NC_009483:2086021:2100634210063421034682835Geobacter uraniireducens Rf4 chromosome, complete genometype IV pilus secretin PilQ2e-0754.7
NC_008752:4589119:4603617460361746061062490Acidovorax avenae subsp. citrulli AAC00-1, complete genomegeneral secretion pathway protein D2e-0754.7
NC_014761:1405408:1423339142333914248951557Oceanithermus profundus DSM 14977 chromosome, complete genometype ii and iii secretion system protein3e-0754.3
NC_010172:31264:3232532325347092385Methylobacterium extorquens PA1, complete genomegeneral secretion pathway protein D5e-0753.1
NC_009831:3612206:3651949365194936540392091Shewanella sediminis HAW-EB3, complete genomeType II secretory pathway component PulD-like protein5e-0753.1
NC_007912:3403101:3411190341119034133732184Saccharophagus degradans 2-40, complete genomePeptidase M41, FtsH6e-0753.1
NC_012988:32996:3299632996353802385Methylobacterium extorquens DM4, complete genomeGeneral secretion pathway protein D6e-0753.1
NC_012660:3573154:3573154357315435755202367Pseudomonas fluorescens SBW25 chromosome, complete genomegeneral secretion pathway protein D/Q7e-0752.8
NC_016612:2902628:2934715293471529366941980Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein D1e-0652.4
NC_008800:3642679:3661224366122436631701947Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,general secretion pathway protein D9e-0752.4
NC_010465:1118147:1130266113026611321881923Yersinia pseudotuberculosis YPIII, complete genomegeneral secretion pathway protein D9e-0752.4
NC_010159:3448490:3467848346784834697701923Yersinia pestis Angola, complete genomegeneral secretion pathway protein D9e-0752.4
NC_004088:3505383:3523708352370835256301923Yersinia pestis KIM, complete genomegeneral secretion protein9e-0752.4
NC_005810:3142384:3153800315380031557221923Yersinia pestis biovar Microtus str. 91001, complete genomegeneral secretion pathway protein D9e-0752.4
NC_008150:513783:5251945251945271161923Yersinia pestis Antiqua, complete genomegeneral secretion pathway protein D9e-0752.4
NC_008149:3373229:3391546339154633934681923Yersinia pestis Nepal516, complete genomegeneral secretion pathway protein D9e-0752.4
NC_009381:775357:7856437856437875651923Yersinia pestis Pestoides F chromosome, complete genomegeneral secretion pathway protein D9e-0752.4
NC_009708:1131500:1141808114180811437301923Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegeneral secretion pathway protein D9e-0752.4
NC_014029:1146900:1158311115831111602331923Yersinia pestis Z176003 chromosome, complete genomegeneral secretion protein9e-0752.4
NC_017168:199381:2096682096682115901923Yersinia pestis A1122 chromosome, complete genomegeneral secretion pathway protein D9e-0752.4
NC_003143:875367:8936848936848956061923Yersinia pestis CO92, complete genomegeneral secretion pathway protein D9e-0752.4
NC_006155:3596120:3614450361445036163721923Yersinia pseudotuberculosis IP 32953, complete genomegeneral secretion pathway protein D9e-0752.4
NC_010634:3509880:3528210352821035301321923Yersinia pseudotuberculosis PB1/+, complete genomegeneral secretion pathway protein D9e-0752.4
NC_008347:3034100:3053668305366830557282061Maricaulis maris MCS10, complete genomegeneral secretion pathway protein D9e-0752.4
NC_017265:1000342:1011756101175610136781923Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,general secretion pathway protein D9e-0752.4
NC_017160:1092839:1103128110312811050501923Yersinia pestis D182038 chromosome, complete genomegeneral secretion protein9e-0752.4
NC_017154:1089044:1100455110045511023771923Yersinia pestis D106004 chromosome, complete genomegeneral secretion protein9e-0752.4
NC_007492:3655545:3655545365554536578962352Pseudomonas fluorescens PfO-1, complete genometype II and III secretion system protein2e-0651.6
NC_009482:485238:5020775020775043592283Synechococcus sp. RCC307 chromosome, complete genomeType II secretory pathway, component PulD2e-0651.6
NC_015224:1067390:1079532107953210814781947Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,general secretion pathway protein D2e-0651.6
NC_008358:2638245:2655587265558726576712085Hyphomonas neptunium ATCC 15444, complete genometype II secretion system protein2e-0651.6
NC_012811:227541:2581722581722602532082Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative General secretion protein D2e-0651.6
NC_008825:3298506:3308485330848533106502166Methylibium petroleiphilum PM1, complete genomefimbrial biogenesis protein2e-0651.2
NC_015138:4584846:4596363459636345988342472Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway protein D2e-0651.2
NC_016745:2229271:2239326223932622404081083Oceanimonas sp. GK1 chromosome, complete genometype II and III secretion system protein3e-0650.4
NC_015572:293665:3106093106093128732265Methylomonas methanica MC09 chromosome, complete genometype IV pilus secretin PilQ4e-0650.4
NC_012560:1564500:1586433158643315886912259Azotobacter vinelandii DJ, complete genomegeneral secretion pathway protein D5e-0650.1
NC_021150:1564229:1586446158644615887042259Azotobacter vinelandii CA6, complete genomegeneral secretion pathway protein D5e-0650.1
NC_008609:1027838:1040015104001510426092595Pelobacter propionicus DSM 2379, complete genometype IV pilus secretin PilQ6e-0649.7
NC_008789:350650:3723233723233739391617Halorhodospira halophila SL1, complete genomepilus (MSHA type) biogenesis protein MshL6e-0649.7
NC_008344:1899317:1913589191358919157512163Nitrosomonas eutropha C91, complete genometype IV pilus secretin PilQ6e-0649.7
NC_008027:2397255:2414673241467324170362364Pseudomonas entomophila L48, complete genometype II secretion system protein XcpQ-2; signal peptide7e-0649.7
NC_019745:3066177:3083625308362530859672343Gloeocapsa sp. PCC 7428, complete genometype II and III secretion system protein7e-0649.7
NC_008095:7139056:7146367714636771490722706Myxococcus xanthus DK 1622, complete genometype IV pilus secretin PilQ8e-0649.3
NC_005773:866157:881817881817882149333Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-0649.3