Pre_GI: BLASTP Hits

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Query: NC_004088:3689000:3719465 Yersinia pestis KIM, complete genome

Start: 3719465, End: 3720115, Length: 651

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:2109843:211944021194402120072633Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1582.4
NC_010676:304405:324705324705325298594Burkholderia phytofirmans PsJN chromosome 2, complete sequenceautoinducer synthesis protein1e-0860.1
NC_009255:763157:783946783946784605660Burkholderia vietnamiensis G4 chromosome 2, complete sequenceautoinducer synthesis protein1e-0860.1
NC_013716:3109700:312764531276453128280636Citrobacter rodentium ICC168, complete genomeN-acyl homoserine lactone synthase CroI2e-34145
NC_014500:4691915:471100447110044711642639Dickeya dadantii 3937 chromosome, complete genomeHomoserine lactone synthase YpeI1e-55216
NC_012779:2755338:276853827685382769203666Edwardsiella ictaluri 93-146, complete genomeautoinducer synthase, putative4e-53207
NC_014618:2139639:215350821535082154152645Enterobacter cloacae SCF1 chromosome, complete genomeacyl-homoserine-lactone synthase9e-46183
NC_010694:1052722:106459110645911065235645Erwinia tasmaniensis, complete genomeAcylhomoserine lactone synthase5e-46184
NC_019973:5650646:568116956811695681804636Mesorhizobium australicum WSM2073, complete genomeN-acyl-L-homoserine lactone synthetase5e-1271.2
NC_015675:6276357:630688063068806307515636Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAcyl-homoserine-lactone synthase5e-1271.2
NC_011894:983572:101055510105551011193639Methylobacterium nodulans ORS 2060, complete genomeautoinducer synthesis protein1e-1583.6
NC_014258:127500:137579137579138217639Pantoea vagans C9-1 plasmid pPag3, complete sequenceautoinducer synthesis protein PagI5e-33140
NC_015259:734795:740657740657741220564Polymorphum gilvum SL003B-26A1 chromosome, complete genomeConjugation factor synthetase; TraI1e-0963.5
NC_015259:673662:682438682438683049612Polymorphum gilvum SL003B-26A1 chromosome, complete genomeConjugation factor synthetase; TraI1e-1066.6
NC_005773:1851116:187394518739451874625681Pseudomonas syringae pv. phaseolicola 1448A, complete genomeautoinducer synthesis protein AhlI9e-35146
NC_016818:2836851:285438028543802854961582Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeN-acyl-L-homoserine lactone synthetase8e-24110
NC_003296:941920:979962979962980510549Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE AUTOINDUCER SYNTHASE (ACYL HOMOSERINE LACTONE SYNTHASE) PROTEIN3e-0858.9
NC_014834:614890:623907623907624536630Rhodopseudomonas palustris DX-1 chromosome, complete genomeacyl-homoserine-lactone synthase7e-1270.9
NC_015637:325561:343273343273343854582Vibrio anguillarum 775 chromosome chromosome II, complete sequenceacyl-homoserine-lactone synthase1e-1273.2
NC_017168:2999514:300765830076583008302645Yersinia pestis A1122 chromosome, complete genomeN-acylhomoserine lactone synthase YpeI1e-54212
NC_017168:3286:132611326113911651Yersinia pestis A1122 chromosome, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_010159:172469:193174193174193701528Yersinia pestis Angola, complete genomeN-acylhomoserine lactone synthase YtbI2e-100364
NC_008150:317903:326133326133326783651Yersinia pestis Antiqua, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_008150:2173708:218594121859412186585645Yersinia pestis Antiqua, complete genomeN-acylhomoserine lactone synthase YpeI1e-54212
NC_017265:809943:817239817239817889651Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,N-3-oxooctanoyl-L-homoserine lactone synthase;N-3-oxohexanoyl-L-homoserine lactone synthase7e-126449
NC_005810:3917254:392723539272353927885651Yersinia pestis biovar Microtus str. 91001, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_005810:2508671:252404325240432524699657Yersinia pestis biovar Microtus str. 91001, complete genomeN-acylhomoserine lactone synthase YpeI2e-54212
NC_003143:1059580:109136310913631092013651Yersinia pestis CO92, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_003143:2741478:275411927541192754775657Yersinia pestis CO92, complete genomeN-acylhomoserine lactone synthase YpeI2e-54212
NC_017154:902739:910970910970911497528Yersinia pestis D106004 chromosome, complete genomeN-acylhomoserine lactone synthase YtbI2e-100364
NC_017160:905783:913079913079913606528Yersinia pestis D182038 chromosome, complete genomeN-acylhomoserine lactone synthase YtbI2e-100364
NC_004088:1909880:191705619170561917712657Yersinia pestis KIM, complete genomehomoserine lactone synthase2e-54212
NC_008149:3556999:358733735873373587987651Yersinia pestis Nepal516, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_009381:588137:595415595415596065651Yersinia pestis Pestoides F chromosome, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_014029:961522:968818968818969345528Yersinia pestis Z176003 chromosome, complete genomeN-acylhomoserine lactone synthase YtbI2e-100364
NC_009708:874770:882063882063882713651Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeN-acylhomoserine lactone synthase YtbI7e-126449
NC_006155:3805640:383744338374433838093651Yersinia pseudotuberculosis IP 32953, complete genomeN-acylhomoserine lactone synthase YspI7e-126449
NC_010634:3720214:375051537505153751165651Yersinia pseudotuberculosis PB1/+, complete genomeautoinducer synthesis protein7e-126449
NC_010465:893921:901200901200901850651Yersinia pseudotuberculosis YPIII, complete genomeautoinducer synthesis protein7e-126449