Pre_GI: BLASTP Hits

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Query: NC_004088:3661601:3681768 Yersinia pestis KIM, complete genome

Start: 3681768, End: 3682877, Length: 1110

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:50391:5047550475515751101Yersinia pestis A1122 chromosome, complete genomehypothetical protein0734
NC_010634:3692321:3712721371272137138211101Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein0734
NC_008149:3529428:3549603354960335507031101Yersinia pestis Nepal516, complete genomehypothetical protein0734
NC_010159:138879:1603571603571614571101Yersinia pestis Angola, complete genomeABC transporter, periplasmic substrate-binding protein0734
NC_008150:361224:3633613633613644611101Yersinia pestis Antiqua, complete genomehypothetical protein0734
NC_010465:933488:9334889334889345881101Yersinia pseudotuberculosis YPIII, complete genomeperiplasmic binding protein0734
NC_009381:627685:6276856276856287851101Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0734
NC_009708:986918:9869189869189880181101Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeABC transporter periplasmic protein0734
NC_014029:1001000:1001057100105710021571101Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0734
NC_017154:941065:9432029432029443021101Yersinia pestis D106004 chromosome, complete genomehypothetical protein0734
NC_003143:1033500:105382810538281054799972Yersinia pestis CO92, complete genomehypothetical protein0663
NC_006155:3779381:379970837997083800679972Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein0663
NC_005810:3964468:396446839644683965439972Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0663
NC_017265:854492:854492854492855463972Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative solute-binding periplasmic protein ofABC transporter0663
NC_017160:945176:945176945176945967792Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-152538
NC_014838:589581:6117686117686128531086Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceperiplasmic binding protein1e-111403
NC_015563:3266004:3292870329287032940811212Delftia sp. Cs1-4 chromosome, complete genomeABC transporter periplasmic protein4e-67255
NC_016745:1719800:1721630172163017227631134Oceanimonas sp. GK1 chromosome, complete genomeiron ABC transporter substrate binding protein1e-55217
NC_008800:614850:6378366378366389811146Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative iron transporter5e-55215
NC_015224:647341:6703166703166714611146Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative iron transporter9e-54211
NC_007355:544796:5615555615555627091155Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceFe(III) dicitrate ABC transporter, permease2e-38159
NC_015276:1426000:1446619144661914477131095Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, periplasmic subunit2e-36153
NC_015573:110108:1179781179781191351158Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein1e-34147
NC_016624:112919:1304651304651316401176Azospirillum lipoferum 4B plasmid AZO_p5, complete sequenceputative siderophore ABC transporter, solute-binding periplasmic component7e-33141
NC_013592:956829:9630759630759641811107Dickeya dadantii Ech586, complete genomeperiplasmic binding protein9e-32137
NC_015276:1426000:1445328144532814464161089Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, periplasmic subunit2e-31136
NC_015566:3417951:3455176345517634562821107Serratia sp. AS12 chromosome, complete genomeABC transporter periplasmic protein6e-25115
NC_013421:1545386:1544325154432515453891065Pectobacterium wasabiae WPP163, complete genomeperiplasmic binding protein6e-1788.6
NC_012917:3198000:3220616322061632216801065Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeperiplasmic binding protein6e-1788.6
NC_008553:1717000:1728270172827017294991230Methanosaeta thermophila PT, complete genomeperiplasmic binding protein2e-1687.4
NC_014507:611625:6315546315546328191266Methanoplanus petrolearius DSM 11571 chromosome, complete genomeperiplasmic binding protein8e-1685.1
NC_013385:1617338:1629574162957416310251452Ammonifex degensii KC4, complete genomecopper amine oxidase domain protein1e-1584.3
NC_014507:611625:6369756369756380451071Methanoplanus petrolearius DSM 11571 chromosome, complete genomeperiplasmic binding protein2e-1480.5
NC_015573:2187688:2205510220551022065471038Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein5e-1479
NC_008553:1038344:1057487105748710587761290Methanosaeta thermophila PT, complete genomeperiplasmic binding protein1e-1378.2
NC_013665:1766158:1795446179544617964591014Methanocella paludicola SANAE, complete genomeputative iron compound ABC transporter iron compound binding protein1e-1274.3
NC_009515:1409912:1413398141339814144981101Methanobrevibacter smithii ATCC 35061, complete genomeiron(III) ABC transporter, substrate-binding component2e-1273.6
NC_009975:1374500:1397266139726613983541089Methanococcus maripaludis C6, complete genomeperiplasmic binding protein2e-1273.6
NC_020418:2868000:2873350287335028743931044Morganella morganii subsp. morganii KT, complete genomeIron(III) ABC transporter, solute-binding protein3e-1273.2
NC_007955:1108000:1129377112937711304891113Methanococcoides burtonii DSM 6242, complete genomeFe3+-hydroxamate binding protein1e-1171.2
NC_008553:1267580:1273621127362112746851065Methanosaeta thermophila PT, complete genomeperiplasmic binding protein2e-1170.5
NC_015416:1832759:1835301183530118365631263Methanosaeta concilii GP-6 chromosome, complete genomeperiplasmic binding protein2e-1067
NC_015519:426948:4620474620474631681122Tepidanaerobacter sp. Re1 chromosome, complete genomeABC transporter periplasmic subunit9e-1064.7
NC_009637:1421885:1428463142846314296831221Methanococcus maripaludis C7 chromosome, complete genomeperiplasmic binding protein2e-0963.9
NC_017192:20404:2140721407224261020Arcobacter sp. L, complete genomeiron ABC transporter substrate binding component4e-0859.3
NC_016884:3219030:322258932225893223530942Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeABC transporter periplasmic protein2e-0757.4
NC_015757:2343193:234677323467732347693921Sulfobacillus acidophilus TPY chromosome, complete genomeperiplasmic binding protein2e-0757
NC_015416:1832759:1836576183657618376491074Methanosaeta concilii GP-6 chromosome, complete genomeperiplasmic binding protein2e-0757
NC_008553:1717000:1724924172492417260421119Methanosaeta thermophila PT, complete genomeperiplasmic binding protein5e-0755.8
NC_002944:4147431:4149262414926241502991038Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-0654.7
NC_006138:3355028:3369082336908233701101029Desulfotalea psychrophila LSv54, complete genomeiron (III) ABC transporter, periplasmic-binding protein9e-0651.6