Pre_GI: BLASTP Hits

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Query: NC_004088:3661601:3679946 Yersinia pestis KIM, complete genome

Start: 3679946, End: 3680218, Length: 273

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:854492:857151857151857423273Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,iron-sulfur cluster protector protein3e-48189
NC_017168:50391:531345313453406273Yersinia pestis A1122 chromosome, complete genomeoxidative damage protection protein3e-48189
NC_003143:1033500:105186810518681052140273Yersinia pestis CO92, complete genomehypothetical protein3e-48189
NC_008150:361224:366002366002366274273Yersinia pestis Antiqua, complete genomehypothetical protein3e-48189
NC_008149:3529428:354777235477723548044273Yersinia pestis Nepal516, complete genomehypothetical protein3e-48189
NC_006155:3779381:379776637977663798038273Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-47186
NC_010634:3692321:371074837107483711020273Yersinia pseudotuberculosis PB1/+, complete genomeFe(II) trafficking protein YggX3e-47186
NC_005810:3964468:396712739671273967399273Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-47186
NC_010465:933488:936165936165936437273Yersinia pseudotuberculosis YPIII, complete genomeProtein-tyrosine-phosphatase3e-47186
NC_010159:138879:158544158544158816273Yersinia pestis Angola, complete genomeputative Fe(2+) trafficking protein YggX3e-47186
NC_009381:627685:630343630343630615273Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-47186
NC_009708:986918:989701989701989973273Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-47186
NC_017047:3907854:391135239113523911624273Rahnella aquatilis HX2 chromosome, complete genomeoxidative damage protection protein1e-43175
NC_016818:3851542:385568438556843855956273Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeFe-S cluster protector protein1e-43175
NC_015061:3840463:384396138439613844233273Rahnella sp. Y9602 chromosome, complete genomeFe(II) trafficking protein YggX1e-43175
NC_014500:1066911:109748710974871097759273Dickeya dadantii 3937 chromosome, complete genomeiron-sulfur cluster protector protein3e-40163
NC_020211:4484817:448591444859144486186273Serratia marcescens WW4, complete genomeprotein that protects iron-sulfur proteins against oxidative damage4e-40162
NC_020418:1397112:141944614194461419718273Morganella morganii subsp. morganii KT, complete genomePutative Fe(2+)-trafficking protein YggX6e-39159
NC_013592:956829:985236985236985508273Dickeya dadantii Ech586, complete genomeFe(II) trafficking protein YggX2e-38157
NC_012962:3864000:386400038640003864272273Photorhabdus asymbiotica, complete genomehypothetical protein2e-36150
NC_013508:275081:294342294342294614273Edwardsiella tarda EIB202, complete genomeputative Fe(2+)-trafficking protein2e-34144
NC_012779:261438:277368277368277640273Edwardsiella ictaluri 93-146, complete genomeputative Fe(2+)2e-34144
NC_010939:1986263:200045420004542000729276Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeProbable Fe(2+)-trafficking protein1e-33141
NC_009053:1942973:197557119755711975846276Actinobacillus pleuropneumoniae L20, complete genomeProbable Fe(2+)-trafficking protein1e-33141
NC_010278:1918000:193715819371581937433276Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein1e-33141
NC_013166:194614:212489212489212764276Kangiella koreensis DSM 16069, complete genomeFe(II) trafficking protein YggX2e-21101
NC_020541:3156500:315986831598683160146279Rhodanobacter sp. 2APBS1, complete genomeFe-S cluster protector protein2e-21100
NC_011901:3072817:308748230874823087754273Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein6e-2199.4
NC_008782:1863853:186688218668821867154273Acidovorax sp. JS42, complete genomeFe(II) trafficking protein YggX1e-2098.6
NC_013889:2603914:260845826084582608733276Thioalkalivibrio sp. K90mix chromosome, complete genomeFe(II) trafficking protein YggX1e-1788.6
NC_010513:1128000:114438211443821144699318Xylella fastidiosa M12 chromosome, complete genomehypothetical protein2e-1787.8
NC_004556:1076063:109504310950431095315273Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-1787.4
NC_010577:1087092:110493011049301105202273Xylella fastidiosa M23, complete genomeFe(II) trafficking protein YggX2e-1787.4
NC_009439:4661102:466438846643884664660273Pseudomonas mendocina ymp, complete genomehypothetical protein2e-1787.4
NC_008789:1237969:124213612421361242408273Halorhodospira halophila SL1, complete genomeFe(II) trafficking protein YggX4e-1786.7
NC_020829:5174354:517986351798635180135273Pseudomonas denitrificans ATCC 13867, complete genomeoxidative damage protection protein7e-1785.9
NC_002488:1812696:181415018141501814467318Xylella fastidiosa 9a5c, complete genomehypothetical protein7e-1785.9
NC_019940:2236630:225444822544482254720273Thioflavicoccus mobilis 8321 chromosome, complete genomeFe-S cluster protector protein1e-1685.5
NC_011761:2641481:264372426437242644005282Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein1e-1685.1
NC_014752:324832:326484326484326750267Neisseria lactamica ST-640, complete genomeFe(2+)-trafficking protein2e-1580.9
NC_015572:427732:432250432250432522273Methylomonas methanica MC09 chromosome, complete genomeFe(2+)-trafficking protein3e-1580.5
NC_014109:27500:319363193632166231Candidatus Riesia pediculicola USDA chromosome, complete genomehypothetical protein2e-1374.7
NC_007645:1336227:135338813533881353657270Hahella chejuensis KCTC 2396, complete genomeFe-S cluster protector protein8e-1165.9
NC_013525:1221604:126197612619761262293318Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeFe(II) trafficking protein YggX4e-1063.5
NC_011831:2728932:274696327469632747265303Chloroflexus aggregans DSM 9485, complete genomeFe(II) trafficking protein YggX1e-0961.6
NC_009523:1101214:112342611234261123713288Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein3e-0960.8
NC_015276:632206:633425633425633700276Marinomonas mediterranea MMB-1 chromosome, complete genomeFe(2+)-trafficking protein5e-0959.7
NC_016631:5438477:544235554423555442627273Granulicella mallensis MP5ACTX8 chromosome, complete genomeFe(II) trafficking protein YggX3e-0857.4