Pre_GI: BLASTP Hits

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Query: NC_004088:3505383:3519037 Yersinia pestis KIM, complete genome

Start: 3519037, End: 3519705, Length: 669

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:3373229:338687533868753387492618Yersinia pestis Nepal516, complete genomegeneral secretion pathway protein J1e-106385
NC_008150:513783:531170531170531787618Yersinia pestis Antiqua, complete genomegeneral secretion pathway protein J4e-106383
NC_005810:3142384:315977731597773160394618Yersinia pestis biovar Microtus str. 91001, complete genomegeneral secretion pathway protein J4e-106383
NC_017265:1000342:101775310177531018349597Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,general secretion pathway protein J3e-102370
NC_017168:199381:215665215665216261597Yersinia pestis A1122 chromosome, complete genomegeneral secretion pathway protein J1e-101369
NC_003143:875367:889013889013889609597Yersinia pestis CO92, complete genomegeneral secretion pathway protein J1e-101369
NC_017160:1092839:110912511091251109721597Yersinia pestis D182038 chromosome, complete genomegeneral secretion pathway protein J4e-101367
NC_006155:3596120:360977836097783610374597Yersinia pseudotuberculosis IP 32953, complete genomeputative general secretion pathway protein J4e-94343
NC_010634:3509880:352353835235383524134597Yersinia pseudotuberculosis PB1/+, complete genomegeneral secretion pathway protein J4e-94343
NC_010465:1118147:113626411362641136860597Yersinia pseudotuberculosis YPIII, complete genomegeneral secretion pathway protein J4e-94343
NC_009708:1131500:114780611478061148402597Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegeneral secretion pathway protein J1e-93342
NC_017154:1089044:110665411066541107049396Yersinia pestis D106004 chromosome, complete genomegeneral secretion pathway protein J2e-70265
NC_014029:1146900:116450911645091164904396Yersinia pestis Z176003 chromosome, complete genomegeneral secretion pathway protein J2e-70265
NC_010159:3448490:346317634631763463571396Yersinia pestis Angola, complete genomegeneral secretion pathway protein J2e-70265
NC_008800:3642679:365707236570723657665594Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,general secretion pathway protein J4e-25114
NC_015224:1067390:108503710850371085630594Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,general secretion pathway protein J precursor1e-24112
NC_020064:3998715:405454740545474055155609Serratia marcescens FGI94, complete genomegeneral secretion pathway protein J3e-1375.1
NC_016612:2902628:294079229407922941391600Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein J9e-1373.6
NC_011751:3530954:355506535550653555670606Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1169.3
NC_008253:3161311:320006032000603200665606Escherichia coli 536, complete genomehypothetical type II secretion protein GspJ2e-1169.3
NC_011740:2986514:298914129891412989746606Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein3e-1168.6
NC_011601:3338888:337086633708663371471606Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype II secretion protein6e-1167.8
NC_011745:3511600:352943835294383530043606Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-1167.8
NC_011742:3277941:329662832966283297233606Escherichia coli S88 chromosome, complete genomehypothetical protein7e-1167.4
NC_008563:3362058:338183633818363382441606Escherichia coli APEC O1, complete genomeputative type II secretion protein GspJ7e-1167.4
NC_010498:3291344:331339233133923313997606Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspJ7e-1167.4
NC_011750:3584000:360295936029593603564606Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-1067
NC_016818:362548:376911376911377594684Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completegeneral secretion pathway protein J5e-1064.7
NC_014836:33278:571235712357800678Desulfurispirillum indicum S5 chromosome, complete genomegeneral secretion pathway protein J7e-0857.4