Pre_GI: BLASTP Hits

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Query: NC_004088:3186954:3205319 Yersinia pestis KIM, complete genome

Start: 3205319, End: 3206512, Length: 1194

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2807302:2825668282566828268611194Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,mannonate hydrolase0831
NC_010159:1558000:1558079155807915592721194Yersinia pestis Angola, complete genomemannonate dehydratase0831
NC_010465:3046904:3065320306532030665131194Yersinia pseudotuberculosis YPIII, complete genomemannonate dehydratase0831
NC_008149:3022970:3041327304132730425201194Yersinia pestis Nepal516, complete genomemannonate dehydratase0831
NC_003143:1441211:1441211144121114424041194Yersinia pestis CO92, complete genomemannonate dehydratase0831
NC_005810:1413305:1431685143168514328781194Yersinia pestis biovar Microtus str. 91001, complete genomemannonate dehydratase0831
NC_009381:2731965:2750321275032127515141194Yersinia pestis Pestoides F chromosome, complete genomemannonate dehydratase0831
NC_014029:1512605:1512605151260515137981194Yersinia pestis Z176003 chromosome, complete genomemannonate dehydratase0831
NC_017154:1454704:1454704145470414558971194Yersinia pestis D106004 chromosome, complete genomemannonate dehydratase0831
NC_017160:1299733:1317914131791413191071194Yersinia pestis D182038 chromosome, complete genomemannonate dehydratase0831
NC_017168:4363000:4363271436327143644641194Yersinia pestis A1122 chromosome, complete genomemannonate dehydratase0831
NC_010634:1565788:1565788156578815669811194Yersinia pseudotuberculosis PB1/+, complete genomemannonate dehydratase0830
NC_006155:1567306:1567306156730615684991194Yersinia pseudotuberculosis IP 32953, complete genomemannonate dehydratase0830
NC_009708:3035798:3054204305420430553971194Yersinia pseudotuberculosis IP 31758 chromosome, complete genomemannonate dehydratase0830
NC_014121:3553809:3568621356862135698111191Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completemannonate dehydratase0712
NC_012880:1091486:1113139111313911143291191Dickeya dadantii Ech703, complete genomemannonate dehydratase0686
CP002185:4791811:4814077481407748152611185Escherichia coli W, complete genomemannonate hydrolase0649
CU928160:4570498:4612278461227846134621185Escherichia coli IAI1 chromosome, complete genomemannonate hydrolase0649
NC_011750:4978000:4999096499909650002801185Escherichia coli IAI39 chromosome, complete genomemannonate dehydratase0649
NC_011741:4570498:4612278461227846134621185Escherichia coli IAI1 chromosome, complete genomemannonate dehydratase0649
NC_013361:5580741:5599012559901256001961185Escherichia coli O26:H11 str. 11368 chromosome, complete genomemannonate dehydratase0649
NC_011745:5114500:5133832513383251350161185Escherichia coli ED1a chromosome, complete genomemannonate dehydratase0649
CP002797:4656327:4679532467953246807161185Escherichia coli NA114, complete genomeMannonate dehydratase0648
NC_008253:4817864:4855676485567648568601185Escherichia coli 536, complete genomemannonate dehydratase0648
NC_004431:5123325:5146365514636551475491185Escherichia coli CFT073, complete genomemannonate dehydratase0648
NC_007946:4875997:4915186491518649163701185Escherichia coli UTI89, complete genomemannonate dehydratase0648
NC_011742:4873351:4894389489438948955731185Escherichia coli S88 chromosome, complete genomemannonate dehydratase0648
AC_000091:4534935:4556316455631645575001185Escherichia coli W3110 DNA, complete genomemannonate hydrolase0648
NC_000913:4528278:4549659454965945508431185Escherichia coli K12, complete genomemannonate dehydratase0648
NC_012967:4510393:4532550453255045337341185Escherichia coli B str. REL606 chromosome, complete genomemannonate dehydratase0648
NC_007613:4403070:4425582442558244267661185Shigella boydii Sb227, complete genomemannonate hydrolase0644
NC_015761:2982000:3001963300196330031471185Salmonella bongori NCTC 12419, complete genomeD-mannonate hydrolase0643
NC_014966:1668822:1688944168894416901311188Vibrio vulnificus MO6-24/O chromosome II, complete sequencemannonate dehydratase0634
NC_016513:1761830:1774617177461717758011185Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completemannonate dehydratase4e-173607
NC_013416:1429881:1440329144032914415131185Aggregatibacter actinomycetemcomitans D11S-1, complete genomemannonate dehydratase1e-172606
NC_014933:814964:8259908259908271621173Bacteroides helcogenes P 36-108 chromosome, complete genomeD-mannonate dehydratase1e-140499
NC_014734:677103:6820916820916832601170Paludibacter propionicigenes WB4 chromosome, complete genomed-mannonate dehydratase5e-136484
NC_003911:1791878:1841740184174018429511212Silicibacter pomeroyi DSS-3, complete genomemannonate dehydratase5e-119427
NC_014655:2533929:2551759255175925529371179Leadbetterella byssophila DSM 17132 chromosome, complete genomed-mannonate dehydratase1e-118426
NC_014041:3197192:3218274321827432194581185Zunongwangia profunda SM-A87 chromosome, complete genomeD-mannonate dehydratase9e-113407
NC_015277:689519:7102537102537114101158Sphingobacterium sp. 21 chromosome, complete genomemannonate dehydratase1e-112406
NC_004663:107019:1243491243491255361188Bacteroides thetaiotaomicron VPI-5482, complete genomemannonate dehydratase2e-88326
NC_009614:2783698:2808032280803228092191188Bacteroides vulgatus ATCC 8482 chromosome, complete genomemannonate dehydratase2e-86319
NC_014650:2097900:2101970210197021030281059Geobacillus sp. Y4.1MC1 chromosome, complete genomemannonate dehydratase3e-72272
NC_007168:2631535:2651844265184426528901047Staphylococcus haemolyticus JCSC1435, complete genomemannonate dehydratase3e-70265
NC_013205:2332174:2351465235146523525201056Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,mannonate dehydratase1e-69263
NC_007644:416000:4337904337904348691080Moorella thermoacetica ATCC 39073, complete genomemannonate dehydratase3e-69262
NC_015389:616430:6505646505646516521089Coriobacterium glomerans PW2 chromosome, complete genomeD-mannonate dehydratase1e-67256
NC_020207:1795993:1810862181086218119441083Enterococcus faecium NRRL B-2354, complete genomeMannonate dehydratase3e-66253
NC_015949:1301004:1320507132050713215921086Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeMannonate dehydratase3e-65249
NC_020063:3690308:3724426372442637254931068Enterobacteriaceae bacterium strain FGI 57, complete genomeD-mannonate dehydratase2e-64246
NC_015516:1518000:1518599151859915196721074Melissococcus plutonius ATCC 35311, complete genomemannonate dehydratase2e-63243
NC_014410:989698:9905089905089915781071Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,mannonate dehydratase3e-62239
NC_019970:929666:9304769304769315461071Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeD-mannonate dehydratase6e-62238
NC_015555:1792242:1810501181050118115771077Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeMannonate dehydratase2e-61236
NC_013171:1731491:1741757174175717428271071Anaerococcus prevotii DSM 20548, complete genomemannonate dehydratase4e-61235
NS_000191:120700:1229481229481240421095Uncultured Termite group 1 bacterium phylotype Rs-D17, completemannonate dehydratase1e-60234
NC_020210:1908000:1925990192599019271051116Geobacillus sp. GHH01, complete genomemannonate dehydratase2e-57223
NC_014915:1880748:1880748188074818818631116Geobacillus sp. Y412MC52 chromosome, complete genomemannonate dehydratase2e-57223
NC_013411:2739989:2740810274081027419251116Geobacillus sp. Y412MC61, complete genomemannonate dehydratase2e-57223
NC_014206:1745203:1749096174909617502111116Geobacillus sp. C56-T3 chromosome, complete genomemannonate dehydratase2e-57223
NC_015500:78223:1031911031911042701080Treponema brennaborense DSM 12168 chromosome, complete genomeMannonate dehydratase3e-56219
NC_018607:921923:9305059305059315721068Brachyspira pilosicoli B2904 chromosome, complete genomemannonate dehydratase3e-55216
NC_019908:121178:1302041302041312711068Brachyspira pilosicoli P43/6/78 chromosome, complete genomemannonate dehydratase6e-55214
NC_012225:2523262:2544859254485925459261068Brachyspira hyodysenteriae WA1, complete genomemannonate dehydratase2e-54213
NC_014330:505412:5334935334935345541062Brachyspira pilosicoli 95/1000 chromosome, complete genomemannonate dehydratase3e-54213
NC_013744:462520:476335476335477228894Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeMannonate dehydratase8e-33141
NC_008010:200796:214312214312215231920Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence5e-27122
NC_009954:1893206:189944918994491900285837Caldivirga maquilingensis IC-167, complete genomeMannonate dehydratase5e-22105
NC_015151:1218390:1218390121839012193971008Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemannonate dehydratase related protein2e-21103
NC_012669:4118230:4137904413790441389651062Beutenbergia cavernae DSM 12333, complete genomeMannonate dehydratase1e-20101