Pre_GI: BLASTP Hits

Some Help

Query: NC_004088:3186954:3203259 Yersinia pestis KIM, complete genome

Start: 3203259, End: 3204503, Length: 1245

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2807302:2823608282360828248521245Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative tryptophan-specific transport protein0792
NC_010465:3046904:3063260306326030645041245Yersinia pseudotuberculosis YPIII, complete genomearomatic amino acid transporter0792
NC_008149:3022970:3039267303926730405111245Yersinia pestis Nepal516, complete genometryptophan-specific transport protein0792
NC_006155:1567306:1569315156931515705591245Yersinia pseudotuberculosis IP 32953, complete genomeputative HAAAP family tryptophan-specific transporter mtr0792
NC_008150:1147883:1147883114788311491271245Yersinia pestis Antiqua, complete genomeputative tryptophan-specific transport protein0792
NC_005810:1413305:1429625142962514308691245Yersinia pestis biovar Microtus str. 91001, complete genometryptophan-specific transport protein0792
NC_003143:1441211:1443220144322014444641245Yersinia pestis CO92, complete genomeputative tryptophan-specific transport protein0792
NC_009381:2731965:2748261274826127495051245Yersinia pestis Pestoides F chromosome, complete genometryptophan-specific transport protein0792
NC_014029:1512605:1514614151461415158581245Yersinia pestis Z176003 chromosome, complete genomeputative tryptophan-specific transport protein0792
NC_017154:1454704:1456713145671314579571245Yersinia pestis D106004 chromosome, complete genomeputative tryptophan-specific transport protein0792
NC_017160:1299733:1315854131585413170981245Yersinia pestis D182038 chromosome, complete genometyrosine-specific transport protein0792
NC_017168:4363000:4365280436528043665241245Yersinia pestis A1122 chromosome, complete genometryptophan-specific transport protein0792
NC_010634:1565788:1567797156779715690411245Yersinia pseudotuberculosis PB1/+, complete genomearomatic amino acid transporter0789
NC_009708:3035798:3052142305214230533861245Yersinia pseudotuberculosis IP 31758 chromosome, complete genometryptophan-specific transport protein0786
NC_010159:1558000:1560088156008815613261239Yersinia pestis Angola, complete genometryptophan-specific transport protein0783
NC_015224:889536:9067989067989080601263Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tryptophan permease1e-122440
NC_004337:3590323:3860500386050038617471248Shigella flexneri 2a str. 301, complete genomelow-affinity tryptophan permease2e-92339
NC_011751:4373961:4373961437396143752081248Escherichia coli UMN026 chromosome, complete genometryptophan permease TnaB3e-92338
NC_011750:4490573:4490573449057344918201248Escherichia coli IAI39 chromosome, complete genometryptophan permease TnaB4e-92338
NC_002655:4747926:4747926474792647491731248Escherichia coli O157:H7 EDL933, complete genomelow affinity tryptophan permease7e-92337
NC_002695:4678945:4678945467894546801921248Escherichia coli O157:H7 str. Sakai, complete genomelow affinity tryptophan permease7e-92337
NC_011353:4782040:4782040478204047832871248Escherichia coli O157:H7 str. EC4115 chromosome, complete genometryptophan permease TnaB7e-92337
NC_013008:4738083:4738083473808347393301248Escherichia coli O157:H7 str. TW14359 chromosome, complete genometryptophan permease TnaB7e-92337
NC_010498:4166903:4166903416690341681501248Escherichia coli SMS-3-5, complete genome2e-90333
NC_009792:3225965:3228824322882432300861263Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-85315
NC_020418:3133831:3150886315088631521541269Morganella morganii subsp. morganii KT, complete genomeTryptophan-specific transport protein1e-84313
CP002797:1960000:1963242196324219644531212Escherichia coli NA114, complete genomeTyrosine-specific transport protein7e-58224
NC_012967:1967675:1967675196767519688861212Escherichia coli B str. REL606 chromosome, complete genometyrosine transporter6e-58224
NC_009348:2034500:2056076205607620572691194Aeromonas salmonicida subsp. salmonicida A449, complete genometyrosine-specific transport protein6e-49195
NC_015663:1902344:1918659191865919198191161Enterobacter aerogenes KCTC 2190 chromosome, complete genometyrosine permease1e-47191
NC_004603:1519904:1532018153201815332231206Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetyrosine-specific transport protein2e-47189
NC_009092:3783000:3796157379615737973441188Shewanella loihica PV-4, complete genomearomatic amino acid permease3e-45182
NC_014125:766576:7945717945717957671197Legionella pneumophila 2300/99 Alcoy chromosome, complete genometryptophan/tyrosine permease6e-36152
NC_009494:775676:8085328085328097941263Legionella pneumophila str. Corby chromosome, complete genometryptophan/tyrosine permease6e-36152
NC_015713:1594114:1597914159791415991431230Simkania negevensis Z chromosome gsn.131, complete genometyrosine-specific transport protein1e-34147
NC_015169:1:2344823448246591212Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequencetryptophan/tyrosine permease1e-33144
NC_002620:229856:2395892395892407851197Chlamydia muridarum Nigg, complete genomeMtr/TnaB/TyrO permease family protein1e-25118
NC_002620:229856:2409822409822421691188Chlamydia muridarum Nigg, complete genomeMtr/TnaB/TyrO permease family protein1e-22108
NC_007109:894000:9146949146949158931200Rickettsia felis URRWXCal2, complete genomePutative to amino acid permeases1e-22107
NC_008601:1151653:1169873116987311710841212Francisella tularensis subsp. novicida U112, complete genomehydroxy/aromatic amino acid permease (HAAAP) family protein2e-1584
NC_019942:1270060:1289390128939012905531164Aciduliprofundum sp. MAR08-339, complete genomeamino acid permease7e-0652